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S36_SO-2_scaffold_154337

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_154337_1
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..846
DNA (846bp) protein (282aa)
Response receiver histidine kinase n=2 Tax=Geobacter metallireducens RepID=Q39S44_GEOMG
response receiver histidine kinase
Response receiver histidine kinase {ECO:0000313|EMBL:ABB32930.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
S36_SO-2_scaffold_154337_2
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(875..1444)
DNA (570bp) protein (190aa)
UPI00021A58A9 related cluster id=5800731 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
S36_SO-2_scaffold_154337_3
AR11, Woesearchaeaota, DPANN, Archaea

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1753..3039
DNA (1287bp) protein (429aa)
elongation factor 1-alpha (EC:2.7.7.4); K03231 elongation factor 1-alpha id=5043694 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Elongation factor 1-alpha
Tax=AR11
S36_SO-2_scaffold_154337_4
AR11, Woesearchaeaota, DPANN, Archaea

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3250..3558
DNA (309bp) protein (103aa)
30S ribosomal protein S10 id=5800771 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps10p; 30S ribosomal protein S10P
Tax=AR11
S36_SO-2_scaffold_154337_5
unknown

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3570..4019
DNA (450bp) protein (150aa)

This feature has no annotations

S36_SO-2_scaffold_154337_6
unknown

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comp(4038..4262)
DNA (225bp) protein (75aa)

This feature has no annotations

S36_SO-2_scaffold_154337_7
unknown

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comp(4262..4987)
DNA (726bp) protein (242aa)

This feature has no annotations

S36_SO-2_scaffold_154337_8
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

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comp(4988..5359)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AEQ1_9BACT
plastocyanin
Tax=RBG_16_Acidobacteria_64_8_curated
S36_SO-2_scaffold_154337_9
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5412..6473)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1PTR8_METMZ
Copper binding protein, plastocyanin/azurin family {ECO:0000313|EMBL:AKB61138.1}; TaxID=1434115 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei SarPi.;"
hypothetical protein
S36_SO-2_scaffold_154337_10
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(6797..7120)
DNA (324bp) protein (108aa)
hypothetical protein id=1241140 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
Tax=CG_Woesearch_02
S36_SO-2_scaffold_154337_11
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(7122..7421)
DNA (300bp) protein (100aa)
hypothetical protein id=1241140 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
Tax=CG_Woesearch_02
S36_SO-2_scaffold_154337_12

Not on your lists

comp(7444..8118)
DNA (675bp) protein (225aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51320.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
id=5048028 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
S36_SO-2_scaffold_154337_13
Anopheles gambiae, Anopheles, Diptera, Neoptera, Arthropoda, Metazoa

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comp(8179..10095)
DNA (1917bp) protein (639aa)
AGAP002737-PA (Fragment) n=1 Tax=Anopheles gambiae RepID=Q7QCP0_ANOGA
AGAP002737-PA {ECO:0000313|EMBL:EAA07771.5}; Flags: Fragment;; TaxID=7165 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles.;" source="Anopheles gambiae (African malaria mosquito).;"
transmembrane protein
S36_SO-2_scaffold_154337_14

Not on your lists

10479..23495
DNA (13017bp) protein (4339aa)
id=5048008 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45602.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Ig family protein
S36_SO-2_scaffold_154337_15

Not on your lists

23516..31198
DNA (7683bp) protein (2561aa)
Parallel beta-helix repeat-containing protein {ECO:0000313|EMBL:KHO45620.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
parallel beta-helix repeat-containing protein id=5048026 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
parallel beta-helix repeat-containing protein
S36_SO-2_scaffold_154337_16
CG_Woesearch_02, Woesearchaeota, Archaea

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31195..33567
DNA (2373bp) protein (791aa)
id=5047272 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=CG_Woesearch_02
S36_SO-2_scaffold_154337_17
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

33734..35005
DNA (1272bp) protein (424aa)
id=5048028 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=CG_Woesearch_01
S36_SO-2_scaffold_154337_18
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35000..36193)
DNA (1194bp) protein (398aa)
ATPase AAA n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B74E74
ATPase
Tax=CG_Desulfob_01
S36_SO-2_scaffold_154337_19

Not on your lists

36642..37016
DNA (375bp) protein (125aa)
id=5048029 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45623.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
S36_SO-2_scaffold_154337_20

Not on your lists

36997..37431
DNA (435bp) protein (145aa)
id=5048029 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45623.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
S36_SO-2_scaffold_154337_21

Not on your lists

37897..38253
DNA (357bp) protein (119aa)
id=5048029 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45623.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
S36_SO-2_scaffold_154337_22
unknown

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38199..38654
DNA (456bp) protein (152aa)

This feature has no annotations

S36_SO-2_scaffold_154337_23
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

38879..39721
DNA (843bp) protein (281aa)
id=5048030 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=CG_Woesearch_02
S36_SO-2_scaffold_154337_24
CG_Woesearch_02, Woesearchaeota, Archaea

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39727..40743
DNA (1017bp) protein (339aa)
id=5048010 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=CG_Woesearch_02
S36_SO-2_scaffold_154337_25
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

40727..40954
DNA (228bp) protein (76aa)
Tax=CG_Woesearch_02
S36_SO-2_scaffold_154337_26
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

41241..41870
DNA (630bp) protein (210aa)
id=5048030 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=CG_Woesearch_02
Displaying 26 items

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