ggKbase home page

S36_SO-2_scaffold_227205

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_227205_1
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(147..1427)
DNA (1281bp) protein (427aa)
Translation initiation factor 2 subunit gamma id=5800779 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
translation initiation factor 2 subunit gamma
Tax=CG_Woesearch_02
S36_SO-2_scaffold_227205_2
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists


comp(1437..1859)
DNA (423bp) protein (141aa)
SSU ribosomal protein S6E id=5799714 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ribosomal protein S6e
Tax=GWA2_WOR_2_47_8_curated
S36_SO-2_scaffold_227205_3

Not on your lists

comp(1959..3683)
DNA (1725bp) protein (575aa)
Predicted glutathione-regulated K(+) efflux system protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W1A1_UNCMA
Monovalent cation:H+ antiporter-2, CPA2 family {ECO:0000313|EMBL:KHO51145.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
glutathione-regulated K(+) efflux system protein
S36_SO-2_scaffold_227205_4
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4067..7459
DNA (3393bp) protein (1131aa)
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Paenibacillus ginsengihumi RepID=UPI0003741049
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:AGA57874.1}; TaxID=717605 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4).;"
5-methyltetrahydrofolate--homocysteine methyltransferase
S36_SO-2_scaffold_227205_5
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

7477..8319
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1BEG4_9ZZZZ
hypothetical protein
Tax=CG_Micra_01
S36_SO-2_scaffold_227205_6
GWE2_Gammaproteobacteria_42_36_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8361..9572)
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00037D8F24
Permeases of the major facilitator superfamily
Tax=GWE2_Gammaproteobacteria_42_36_curated
S36_SO-2_scaffold_227205_7
unknown

Not on your lists

9888..10052
DNA (165bp) protein (55aa)

This feature has no annotations

S36_SO-2_scaffold_227205_8
unknown

Not on your lists

comp(10049..11017)
DNA (969bp) protein (323aa)

This feature has no annotations

S36_SO-2_scaffold_227205_9
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(11555..11704)
DNA (150bp) protein (50aa)
hypothetical protein
hypothetical protein id=14427386 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CG_Elusi_05
S36_SO-2_scaffold_227205_10
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(11837..12502)
DNA (666bp) protein (222aa)
hypothetical protein
HAD superfamily (subfamily IA) hydrolase, TIGR02253; K07025 putative hydrolase of the HAD superfamily id=5241563 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR11
S36_SO-2_scaffold_227205_11
unknown

Not on your lists

comp(12567..13184)
DNA (618bp) protein (206aa)

This feature has no annotations

Displaying 11 items

View Taxonomy