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S36_SO-2_scaffold_580141

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_580141_1

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comp(30..269)
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50926.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
hypothetical protein id=5046020 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
S36_SO-2_scaffold_580141_2
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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393..1412
DNA (1020bp) protein (340aa)
Uncharacterized protein {ECO:0000313|EMBL:KKG08762.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.A.1B.4.;"
hypothetical protein
S36_SO-2_scaffold_580141_3

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comp(1422..2960)
DNA (1539bp) protein (513aa)
Glycyl-tRNA synthetase (EC:6.1.1.14)
Glycyl-tRNA synthetase {ECO:0000313|EMBL:KHO52157.1}; Flags: Fragment;; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Glycyl-tRNA synthetase id=5799897 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
S36_SO-2_scaffold_580141_4
RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated, Moranbacteria, Parcubacteria, Bacteria

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comp(3019..3939)
DNA (921bp) protein (307aa)
hypothetical protein; K09799 hypothetical protein id=5803102 bin=OD1_GWC2_34_28 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
Tax=RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated
S36_SO-2_scaffold_580141_5
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(3975..5489)
DNA (1515bp) protein (505aa)
Transporter n=1 Tax=Moorea producens 3L RepID=F4XXP1_9CYAN
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
Sodium-dependent transporter
S36_SO-2_scaffold_580141_6
CG_Woesearch_02, Woesearchaeota, Archaea

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5571..6785
DNA (1215bp) protein (405aa)
replication factor C large subunit; K04800 replication factor C large subunit id=5047300 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
replication factor C large subunit
Tax=CG_Woesearch_02
S36_SO-2_scaffold_580141_7
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6799..7905
DNA (1107bp) protein (369aa)
Beta-lactamase domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QV25_9EURY
Beta-lactamase domain protein {ECO:0000313|EMBL:EFW91543.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.;"
beta-lactamase
S36_SO-2_scaffold_580141_8

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7967..10381
DNA (2415bp) protein (805aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] id=5048462 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02005}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02005};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02005}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Valine-tRNA ligase
S36_SO-2_scaffold_580141_9
unknown

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comp(10387..10896)
DNA (510bp) protein (170aa)

This feature has no annotations

S36_SO-2_scaffold_580141_10
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(10977..11609)
DNA (633bp) protein (211aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MQA2_9BACT
Tax=CG_Pacearch_04
Displaying 10 items

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