ggKbase home page

S36_SO-2_scaffold_420791

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_420791_1
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3..170)
DNA (168bp) protein (56aa)
hypothetical protein
id=5103355 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
S36_SO-2_scaffold_420791_2
GWA2_OP11_37_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(337..978)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Emiliania huxleyi CCMP1516 RepID=R1DRX1_EMIHU
Uncharacterized protein {ECO:0000313|EMBL:KKQ36137.1}; TaxID=1618481 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_37_7.;"
S36_SO-2_scaffold_420791_3
unknown

Not on your lists

comp(1155..1550)
DNA (396bp) protein (132aa)

This feature has no annotations

S36_SO-2_scaffold_420791_4

Not on your lists

comp(1746..3665)
DNA (1920bp) protein (640aa)
DEAD/DEAH box helicase protein {ECO:0000313|EMBL:KHO51870.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Putative DNA helicase id=5800576 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DEAD/DEAH box helicase
S36_SO-2_scaffold_420791_5
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(3852..5759)
DNA (1908bp) protein (636aa)
GTP pyrophosphokinase id=5800564 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
SpoT; guanosine polyphosphate pyrophosphohydrolase/synthetase
Tax=CG_Woesearch_01
S36_SO-2_scaffold_420791_6
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

6118..7047
DNA (930bp) protein (310aa)
transcription factor tFIIB cyclin-like protein; K03124 transcription initiation factor TFIIB id=5043581 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transcription initiation factor IIB
Tax=CG_Woesearch_01
S36_SO-2_scaffold_420791_7
unknown

Not on your lists

7050..7214
DNA (165bp) protein (55aa)

This feature has no annotations

S36_SO-2_scaffold_420791_8

Not on your lists

comp(7221..7541)
DNA (321bp) protein (107aa)
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) RepID=A6VI58_METM7 id=5103637 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
cysteine methyltransferase
Cysteine methyltransferase {ECO:0000313|EMBL:AJF62918.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
S36_SO-2_scaffold_420791_9
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

7720..7971
DNA (252bp) protein (84aa)
id=5051026 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
S36_SO-2_scaffold_420791_10
unknown

Not on your lists

7968..8156
DNA (189bp) protein (63aa)

This feature has no annotations

S36_SO-2_scaffold_420791_11
R_OD1_Giovannonibacteria_43_16, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(8151..8480)
DNA (330bp) protein (110aa)
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFV9_NITGG
pterin-4-alpha-carbinolamine dehydratase
Tax=RIFCSPHIGHO2_02_OD1_Giovannonibacteria_43_16_curated
S36_SO-2_scaffold_420791_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(8483..9691)
DNA (1209bp) protein (403aa)
Methylase id=5799699 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
S36_SO-2_scaffold_420791_13
unknown

Not on your lists

comp(9740..10684)
DNA (945bp) protein (315aa)

This feature has no annotations

S36_SO-2_scaffold_420791_14

Not on your lists


10811..11506
DNA (696bp) protein (232aa)
50S ribosomal protein L1 id=5800447 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L1 {ECO:0000313|EMBL:AJF61778.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
50S ribosomal protein L1
S36_SO-2_scaffold_420791_15
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


11543..12595
DNA (1053bp) protein (351aa)
50S ribosomal protein L10 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VVQ4_9EURY
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
rplP0; acidic ribosomal protein P0
S36_SO-2_scaffold_420791_16
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

12642..12977
DNA (336bp) protein (112aa)
50S ribosomal protein L12 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WM01_9EURY
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
50S ribosomal protein L12P
S36_SO-2_scaffold_420791_trna_1
unknown

Not on your lists

13044..13131
DNA (88bp)
transferRNA Pseudo
S36_SO-2_scaffold_420791_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

13316..14215
DNA (900bp) protein (300aa)
Uncharacterized protein (Fragment) id=5800444 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
putative archaeal coiled-coil protein
Tax=CG_Woesearch_02
S36_SO-2_scaffold_420791_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14251..15678
DNA (1428bp) protein (476aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
fabF-1b; 3-oxoacyl-(Acyl-carrier-protein) synthase 2 (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XJ09_DELAC
S36_SO-2_scaffold_420791_19
unknown

Not on your lists

15918..16796
DNA (879bp) protein (293aa)

This feature has no annotations

S36_SO-2_scaffold_420791_20
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists


17083..17421
DNA (339bp) protein (113aa)
50S ribosomal protein L7Ae id=5800777 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rpl7ae; 50S ribosomal protein L7Ae
Tax=AR15
S36_SO-2_scaffold_420791_21

Not on your lists


17445..17795
DNA (351bp) protein (117aa)
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
rps28e; 30S ribosomal protein S28; K02979 small subunit ribosomal protein S28e id=5045757 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S28e
S36_SO-2_scaffold_420791_22
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

17819..18115
DNA (297bp) protein (99aa)
50S ribosomal protein L24e n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VTZ2_METIM
ribosomal protein L24E
Tax=RBG_16_Euryarchaeota_68_12_curated
S36_SO-2_scaffold_420791_23
R_RIF_OD1_12_48_27, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

18173..18664
DNA (492bp) protein (164aa)
nucleoside-diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] id=5045753 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ndk2; putative nucleoside diphosphate kinase
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_12_48_27_curated
S36_SO-2_scaffold_420791_24
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

18670..19317
DNA (648bp) protein (216aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sulfaticallidus PM70-1.;"
Adenylate kinase n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BAU5_9EURY
Adenylate kinase
S36_SO-2_scaffold_420791_25
unknown

Not on your lists

comp(19314..19940)
DNA (627bp) protein (209aa)

This feature has no annotations

S36_SO-2_scaffold_420791_26
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

20042..22267
DNA (2226bp) protein (742aa)
Elongation factor 2 n=6 Tax=Methanocaldococcus RepID=EF2_METJA id=5103761 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Elongation factor 2
Tax=CG_Woesearch_03
S36_SO-2_scaffold_420791_27
unknown

Not on your lists

22326..22760
DNA (435bp) protein (145aa)

This feature has no annotations

S36_SO-2_scaffold_420791_28
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


22748..23347
DNA (600bp) protein (200aa)
30S ribosomal protein S7P; K02992 small subunit ribosomal protein S7 id=5043965 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S7
Tax=CG_Woesearch_01
S36_SO-2_scaffold_420791_29
unknown

Not on your lists

23382..24140
DNA (759bp) protein (253aa)

This feature has no annotations

Displaying items 1-30 of 70 in total

View Taxonomy