ggKbase home page

rifoxya1_full_scaffold_1172

Search features with annotation key words

Displaying 21 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxya1_full_scaffold_1172_1
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

1..2295
DNA (2295bp) protein (765aa)
hypothetical protein Tax=CG_Pacearch_04
rifoxya1_full_scaffold_1172_2
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(2296..3480)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B1CCA
hypothetical protein; K08971 putative membrane protein Tax=AR19
hypothetical protein
rifoxya1_full_scaffold_1172_3
RIFOXYA2_FULL_Berkelbacteria_43_10_curated, Berkelbacteria, Bacteria

Not on your lists

3523..4611
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037F2F16 rbh
leucyl aminopeptidase Tax=RIFOXYA2_FULL_Berkelbacteria_43_10_curated
peptidase M29 aminopeptidase II
rifoxya1_full_scaffold_1172_4
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

4646..5605
DNA (960bp) protein (320aa)
tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] Tax=CG_Pacearch_04
tyrosyl-tRNA synthetase (EC:6.1.1.1)
tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] alias=gwa2_scaffold_1009_6 id=5045041 tax=GW2011_AR10 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota organism_desc=gwa2_.44_58 (temp)
rifoxya1_full_scaffold_1172_5
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

5624..6682
DNA (1059bp) protein (353aa)
clsA; cardiolipin synthase (EC:2.7.8.-)
Cardiolipin synthase Tax=AR13
Major cardiolipin synthase ClsA alias=gwe2_scaffold_53_30 id=2076272 tax=GWE2_OD1_38_254 species=Bacillus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes
rifoxya1_full_scaffold_1172_6

Not on your lists

comp(6683..7603)
DNA (921bp) protein (307aa)
TGS protein {ECO:0000313|EMBL:KHO52966.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
TGS domain-containing protein alias=scaffold_5_122,RBG2_C00005G00122 id=1241978 tax=RBG2 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria
TGS domain-containing protein
rifoxya1_full_scaffold_1172_7
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

7713..8474
DNA (762bp) protein (254aa)
no description Tax=AR19
rifoxya1_full_scaffold_1172_8
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

8530..8745
DNA (216bp) protein (72aa)
Uncharacterized protein Tax=AR13
rifoxya1_full_scaffold_1172_9
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

8738..9109
DNA (372bp) protein (124aa)
PIN domain-containing protein Tax=AR13
Probable ribonuclease VapC alias=AR15_final_v5_549 id=5800072 tax=GW2011_AR15 species=Thermococcus sp. AM4 genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota
PIN domain-containing protein
rifoxya1_full_scaffold_1172_10
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

9144..10358
DNA (1215bp) protein (405aa)
zinc protease (EC:3.4.99.-)
Peptidase M16 inactive domain protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZC5_9FIRM
peptidase Tax=RBG_13_Pacearchaeota_33_26_curated
rifoxya1_full_scaffold_1172_11
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(10359..10625)
DNA (267bp) protein (89aa)
Putative toxin RelE4 Tax=CG_Micra_04
hypothetical protein alias=gwa2_scaffold_5961_38 id=5050814 tax=GW2011_AR10 species=Methanocaldococcus jannaschii genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota organism_desc=gwa2_.44_58 (temp)
hypothetical protein
rifoxya1_full_scaffold_1172_12
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10622..10921)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TI75_METAC
Uncharacterized protein {ECO:0000313|EMBL:AAM07625.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina ac
hypothetical protein
rifoxya1_full_scaffold_1172_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(10921..11076)
DNA (156bp) protein (52aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374A8DD
Tax=CG_Woesearch_02
rifoxya1_full_scaffold_1172_14
unknown

Not on your lists

comp(11143..11322)
DNA (180bp) protein (60aa)

This feature has no annotations

rifoxya1_full_scaffold_1172_15
unknown

Not on your lists

11479..13278
DNA (1800bp) protein (600aa)

This feature has no annotations

rifoxya1_full_scaffold_1172_16
unknown

Not on your lists

13280..15109
DNA (1830bp) protein (610aa)
Surface layer protein B (SlgB-2) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28859_ARCFU Tax=AR20
Surface layer protein B SlgB-2
Surface layer protein B (SlgB-2) alias=gwa2_scaffold_32_415 id=5040283 tax=GW2011_AR20 species=Archaeoglobus fulgidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota organism_desc=DELETE: see complete genome
rifoxya1_full_scaffold_1172_17

Not on your lists

15134..15457
DNA (324bp) protein (108aa)
Marine sediment metagenome DNA, contig: S03H2_S09736 {ECO:0000313|EMBL:GAH74748.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifoxya1_full_scaffold_1172_18
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

15445..15705
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C9408
arginase Tax=RBG_13_Pacearchaeota_33_26_curated
Arginase
rifoxya1_full_scaffold_1172_19
unknown

Not on your lists

15811..16035
DNA (225bp) protein (75aa)

This feature has no annotations

rifoxya1_full_scaffold_1172_20
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(16026..16715)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003689004
Hef nuclease; K10896 fanconi anemia group M protein Tax=RBG_13_Pacearchaeota_33_26_curated
Hef nuclease
rifoxya1_full_scaffold_1172_21
unknown

Not on your lists

16777..17985
DNA (1209bp) protein (403aa)

This feature has no annotations

Displaying 21 items

View Taxonomy