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rifoxya1_full_scaffold_5065

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxya1_full_scaffold_5065_1
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(3..818)
DNA (816bp) protein (272aa)
Putative uncharacterized protein n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YVS2_THEON
Fe-S oxidoreductase Tax=RBG_13_Pacearchaeota_33_26_curated
radical SAM protein
rifoxya1_full_scaffold_5065_2
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(852..2168)
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003648333
peptidase M50 Tax=RBG_13_Pacearchaeota_33_26_curated
Peptidase M50
rifoxya1_full_scaffold_5065_3

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comp(2379..2771)
DNA (393bp) protein (131aa)
Translation initiation factor 5A n=1 Tax=sediment metagenome RepID=D9PEV2_9ZZZZ
Translation initiation factor 5A {ECO:0000313|EMBL:EFK97888.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
Translation initiation factor 5A
rifoxya1_full_scaffold_5065_4
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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2829..3500
DNA (672bp) protein (224aa)
FKBP-type peptidyl-prolyl cis-trans isomerase n=1 Tax=sediment metagenome RepID=D9PEV4_9ZZZZ
peptidyl-prolyl cis-trans isomerase Tax=RBG_13_Pacearchaeota_33_26_curated
Peptidyl-prolyl cis-trans isomerase
rifoxya1_full_scaffold_5065_5
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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3506..4618
DNA (1113bp) protein (371aa)
Cell division protein FtsZ n=1 Tax=sediment metagenome RepID=D9PEV5_9ZZZZ
cell division protein FtsZ Tax=RBG_16_Pacearchaeota_35_8_curated
Cell division protein FtsZ
rifoxya1_full_scaffold_5065_6
unknown

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4615..5067
DNA (453bp) protein (151aa)

This feature has no annotations

rifoxya1_full_scaffold_5065_7
unknown

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comp(5277..5630)
DNA (354bp) protein (118aa)

This feature has no annotations

rifoxya1_full_scaffold_5065_8
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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5741..6202
DNA (462bp) protein (154aa)
NusG antitermination factor; K02601 transcriptional antiterminator NusG Tax=RBG_16_Pacearchaeota_35_8_curated
LSU ribosomal protein L24A Rpl24A
nusG; transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG alias=gwa2_scaffold_32_146 id=5040014 tax=GW2011_AR20 species=Archaeoglobus fulgidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota organism_desc=DELETE: see complete genome
rifoxya1_full_scaffold_5065_9
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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6192..6833
DNA (642bp) protein (214aa)
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RBG_13_Pacearchaeota_33_26_curated
LSU ribosomal protein L11P
LSU ribosomal protein L11P alias=gwa2_scaffold_32_147 id=5040015 tax=GW2011_AR20 species=Methanothermus fervidus genus=Methanothermus taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota organism_desc=DELETE: see complete genome
DPANN? Jill Banfield (10/31/14)
rifoxya1_full_scaffold_5065_10

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6956..7174
DNA (219bp) protein (73aa)
50S ribosomal protein L37Ae n=2 Tax=Euryarchaeota RepID=M9SHI5_9EURY
50S ribosomal protein L37Ae {ECO:0000256|HAMAP-Rule:MF_00327}; Ribosomal protein L43e {ECO:0000256|HAMAP-Rule:MF_00327}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
50S ribosomal protein L37Ae
rifoxya1_full_scaffold_5065_11

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7315..7644
DNA (330bp) protein (110aa)
Prefoldin subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; GimC subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
Prefoldin subunit beta alias=gwa2_scaffold_6662_8 id=5050960 tax=GW2011_AR18 species=unknown genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota organism_desc=gwa2_.30_20c
prefoldin subunit beta
rifoxya1_full_scaffold_5065_12

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7706..8101
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000377C38B
Marine sediment metagenome DNA, contig: S12H4_L00299 {ECO:0000313|EMBL:GAI87565.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
rifoxya1_full_scaffold_5065_13

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8167..8358
DNA (192bp) protein (64aa)
Marine sediment metagenome DNA, contig: S01H1_S09368 {ECO:0000313|EMBL:GAG04399.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifoxya1_full_scaffold_5065_14

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8364..8789
DNA (426bp) protein (142aa)
Protein containing Nucleotide binding protein, PINc protein {ECO:0000313|EMBL:AJF62915.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Protein containing Nucleotide binding protein, PINc protein
Protein containing Nucleotide binding protein, PINc domain alias=gwa2_scaffold_226_179 id=5042951 tax=GW2011_AR20 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=DELETE: see complete genome
rifoxya1_full_scaffold_5065_15

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8786..9328
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003818B6E
Uncharacterized protein {ECO:0000313|EMBL:KHO51458.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rifoxya1_full_scaffold_5065_16

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comp(9325..9717)
DNA (393bp) protein (131aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51457.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rifoxya1_full_scaffold_5065_17
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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9855..11597
DNA (1743bp) protein (581aa)
Marine sediment metagenome DNA, contig: S03H2_S04299 Tax=RBG_13_Pacearchaeota_33_26_curated
rifoxya1_full_scaffold_5065_18

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comp(11612..12202)
DNA (591bp) protein (197aa)
Marine sediment metagenome DNA, contig: S12H4_S10676 {ECO:0000313|EMBL:GAI99123.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
phosphoesterase alias=gwa2_scaffold_3930_15 id=5049617 tax=GW2011_AR18 species=Methanothermobacter marburgensis genus=Methanothermobacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota organism_desc=gwa2_.30_20c
Membrane-associated phospholipid phosphatase
rifoxya1_full_scaffold_5065_19
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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12251..12763
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003787FEB
id=5049620 Tax=RBG_16_Pacearchaeota_35_8_curated
rifoxya1_full_scaffold_5065_20
AR13, Pacearchaeaota, DPANN, Archaea

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12760..13263
DNA (504bp) protein (168aa)
DedA n=1 Tax=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) RepID=Q30PK1_SULDN
hypothetical protein Tax=AR13
hypothetical protein
rifoxya1_full_scaffold_5065_21

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comp(13324..14016)
DNA (693bp) protein (231aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50429.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
Displaying 21 items

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