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rifoxya1_full_scaffold_6396

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxya1_full_scaffold_6396_1
unknown

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2..292
DNA (291bp) protein (97aa)

This feature has no annotations

rifoxya1_full_scaffold_6396_2
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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comp(289..1155)
DNA (867bp) protein (289aa)
pseudouridylate synthase TruB domain protein; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Tax=RBG_16_Pacearchaeota_35_8_curated
H/ACA RNA-protein complex component Cbf5p (EC:5.4.99.12); K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] alias=gwa2_scaffold_1782_24 id=5046920 tax=GW2011_AR3 species=unknown genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota organism_desc=gwa2_.43_13b
tRNA pseudouridine synthase b (EC:4.2.1.70)
rifoxya1_full_scaffold_6396_3
RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated, Campbellbacteria, Parcubacteria, Bacteria

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comp(1152..1871)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Methanothermococcus thermolithotrophicus RepID=UPI000380160E
Putative DNA alkylation repair enzyme Tax=RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated
DNA alkylation repair enzyme
rifoxya1_full_scaffold_6396_4
AR13, Pacearchaeaota, DPANN, Archaea

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1886..2218
DNA (333bp) protein (111aa)
Uncharacterized protein Tax=AR13
MazG nucleotide pyrophosphohydrolase alias=ACD61_10510.15360.13G0012,ACD61_10510.15360.13_12,ACD61_C00068G00012 id=92097 tax=ACD61 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11
ypjD; nucleotide phosphohydrolase
rifoxya1_full_scaffold_6396_5
unknown

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comp(2219..2977)
DNA (759bp) protein (253aa)

This feature has no annotations

rifoxya1_full_scaffold_6396_6
AR19, Pacearchaeaota, DPANN, Archaea

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comp(3038..3607)
DNA (570bp) protein (190aa)
50S ribosomal protein L31e n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P6G3_METFA
ribosomal protein L31e; K02910 large subunit ribosomal protein L31e Tax=AR19
50S ribosomal protein L31e
rifoxya1_full_scaffold_6396_7
unknown

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comp(3597..4043)
DNA (447bp) protein (149aa)

This feature has no annotations

rifoxya1_full_scaffold_6396_8
CG_Pacearch_01, Pacearchaeota, Archaea

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comp(4045..4248)
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036C1FE9
hypothetical protein Tax=CG_Pacearch_01
rifoxya1_full_scaffold_6396_9
CG_Pacearch_01, Pacearchaeota, Archaea

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comp(4248..4673)
DNA (426bp) protein (142aa)
ribosomal protein S19e; K02966 small subunit ribosomal protein S19e Tax=CG_Pacearch_01
30S ribosomal protein S19e alias=AR15_final_v5_1172 id=5800695 tax=GW2011_AR15 species=Methanoregula boonei genus=Methanoregula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota
ribosomal protein S19e
rifoxya1_full_scaffold_6396_10
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(4759..4980)
DNA (222bp) protein (74aa)
Tax=CG_Pacearch_01
Displaying 10 items

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