ggKbase home page

rifoxya1_full_scaffold_10021

Search features with annotation key words

Displaying 15 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxya1_full_scaffold_10021_1
unknown

Not on your lists

comp(2..94)
DNA (93bp) protein (31aa)

This feature has no annotations

rifoxya1_full_scaffold_10021_2
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


comp(94..396)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003790FD9
rps28e; 30S ribosomal protein S28e Tax=RBG_16_Pacearchaeota_35_8_curated
30S ribosomal protein S28e
rifoxya1_full_scaffold_10021_3

Not on your lists


comp(404..703)
DNA (300bp) protein (100aa)
Marine sediment metagenome DNA, contig: S03H2_L02920 {ECO:0000313|EMBL:GAH35190.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
50S ribosomal protein L7Ae alias=AR15_final_v5_1254 id=5800777 tax=GW2011_AR15 species=Aeropyrum pernix genus=Aeropyrum taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota
50S ribosomal protein L7
rifoxya1_full_scaffold_10021_4

Not on your lists


comp(793..1185)
DNA (393bp) protein (131aa)
Marine sediment metagenome DNA, contig: S03H2_L02920 {ECO:0000313|EMBL:GAH35186.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Probable tRNA threonylcarbamoyladenosine biosynthesis protein KAE1 homolog alias=AR15_final_v5_1122 id=5800645 tax=GW2011_AR15 species=unknown genus=Pyrococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota
protein kinase
rifoxya1_full_scaffold_10021_5

Not on your lists

comp(1190..1471)
DNA (282bp) protein (94aa)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJS3_ACIS0
tRNA threonylcarbamoyladenosine biosynthesis protein {ECO:0000313|EMBL:KHO54970.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
Suspect SCG annotation. See neighboring gene [rifoxya1_full_scaffold_10021_4].
metallohydrolase, glycoprotease/Kae1 family
rifoxya1_full_scaffold_10021_6
AR1, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(1544..1714)
DNA (171bp) protein (57aa)
Tax=AR1
rifoxya1_full_scaffold_10021_7
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(1829..2182)
DNA (354bp) protein (118aa)
hypothetical protein; K09005 hypothetical protein Tax=CG_Pacearch_06
rifoxya1_full_scaffold_10021_8
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(2179..2595)
DNA (417bp) protein (139aa)
Nucleotide-binding protein, PIN domain-containing protein Tax=AR19
hypothetical protein alias=gwa2_scaffold_665_42 id=5044683 tax=GW2011_AR4 species=Halorubrum lacusprofundi genus=Halorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota organism_desc=gwa2_.45_18
Protein containing Nucleotide binding protein, PINc protein
rifoxya1_full_scaffold_10021_9
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(2573..2809)
DNA (237bp) protein (79aa)
hypothetical protein Tax=AR19
hypothetical protein alias=gwa2_scaffold_2361_37 id=5048108 tax=GW2011_AR4 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=gwa2_.45_18
hypothetical protein
rifoxya1_full_scaffold_10021_10

Not on your lists

comp(2844..3245)
DNA (402bp) protein (134aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO54967.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
metallopeptidase alias=gwa2_scaffold_5961_24 id=5050800 tax=GW2011_AR10 species=Thermosphaera aggregans genus=Thermosphaera taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota organism_desc=gwa2_.44_58 (temp)
hypothetical protein
rifoxya1_full_scaffold_10021_11
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

3296..3889
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29680_ARCFU
hydroxyacylglutathione hydrolase (glyoxalase II) Tax=RBG_13_Woesearchaeota_36_6_curated
Zn-dependent hydrolase
rifoxya1_full_scaffold_10021_12

Not on your lists

3947..4408
DNA (462bp) protein (154aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO47942.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
DNA polymerase beta domain-containing protein; K07075 alias=gwa2_scaffold_117_91 id=5041690 tax=GW2011_AR4 species=Methanotorris igneus genus=Methanotorris taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota organism_desc=gwa2_.45_18
DNA polymerase beta domain-containing protein
rifoxya1_full_scaffold_10021_13

Not on your lists

4405..4767
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S2Y0_FERPA
Uncharacterized protein {ECO:0000313|EMBL:KHO53027.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
hypothetical protein
rifoxya1_full_scaffold_10021_14

Not on your lists

comp(4764..5066)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5STP4_PLAL2
Uncharacterized protein {ECO:0000313|EMBL:KHO52807.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
hypothetical protein
rifoxya1_full_scaffold_10021_15
unknown

Not on your lists

comp(5206..5805)
DNA (600bp) protein (200aa)

This feature has no annotations

Displaying 15 items

View Taxonomy