ggKbase home page

rifoxya1_full_scaffold_24677

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxya1_full_scaffold_24677_1
unknown

Not on your lists

2..97
DNA (96bp) protein (32aa)

This feature has no annotations

rifoxya1_full_scaffold_24677_2
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(70..216)
DNA (147bp) protein (49aa)
transmembrane_regions Tax=AR19
rifoxya1_full_scaffold_24677_3
GWE2_OD1_40_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(244..429)
DNA (186bp) protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR40698.1}; TaxID=1619033 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWE2_40_11.;"
hypothetical protein; K09779 hypothetical protein
Putative uncharacterized protein alias=gwe2_scaffold_308_6 id=1955915 tax=GWE2_OD1_40_11 species=Methanosaeta harundinacea 6Ac genus=Methanosaeta taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota
rifoxya1_full_scaffold_24677_4
unknown

Not on your lists

comp(486..725)
DNA (240bp) protein (80aa)

This feature has no annotations

rifoxya1_full_scaffold_24677_5

Not on your lists

comp(803..1138)
DNA (336bp) protein (112aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO48798.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
RNA recognition motif-containing protein alias=ws6_closed_nogaps_final_838 id=5099591 tax=WS6_CLOSED species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria organism_desc=RuBisCO project complete genome
RNA-binding protein
rifoxya1_full_scaffold_24677_6
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

1215..1817
DNA (603bp) protein (201aa)
type II restriction enzyme MjaI (EC:3.1.21.4) Tax=CG_Wolfe_01
type II restriction enzyme MjaI (EC:3.1.21.4)
type II restriction endonuclease MjaI n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B2EDCE
rifoxya1_full_scaffold_24677_7
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(1809..2849)
DNA (1041bp) protein (347aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae;
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AMQ0_FERAC
hypothetical protein
rifoxya1_full_scaffold_24677_8
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2833..2985)
DNA (153bp) protein (51aa)
hypothetical protein
alias=gwa2_scaffold_226_63 id=5042835 tax=GW2011_AR20 organism_desc=DELETE: see complete genome
Tax=AR20
rifoxya1_full_scaffold_24677_9
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

3178..3576
DNA (399bp) protein (133aa)
Transcriptional repressor NrdR n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WSL3_9EURY
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR Tax=RBG_13_Pacearchaeota_33_26_curated
Transcriptional repressor NrdR
rifoxya1_full_scaffold_24677_10
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

3667..3822
DNA (156bp) protein (52aa)
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
MazG nucleotide pyrophosphohydrolase domain-containing protein alias=gwe1_scaffold_5_676,ACD58_39_12_C00001G00676 id=1263879 tax=ACD58_39_12 species=Listeria genus=Listeria taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes
MazG nucleotide pyrophosphohydrolase domain.
rifoxya1_full_scaffold_24677_11
Persephonella marina, Persephonella, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

3823..4008
DNA (186bp) protein (62aa)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:ACO04393.1}; EC=1.17.4.1 {ECO:0000313|EMBL:ACO04393.1};; TaxID=123214 species="Bacteria; Aquificae; Aquificales; Hyd
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QPQ0_PERMH
rifoxya1_full_scaffold_24677_12
Thermoanaerobacter ethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

3953..4870
DNA (918bp) protein (306aa)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Thermoanaerobacter thermohydrosulfuricus WC1 RepID=M8CWK5_THETY
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EGD51463.1}; TaxID=509192 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobact
anaerobic ribonucleoside-triphosphate reductase
rifoxya1_full_scaffold_24677_13
RLO_OD1_Falkowbacteria_42_13, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

4816..5766
DNA (951bp) protein (317aa)
anaerobic ribonucleoside triphosphate reductase (EC:1.17.4.2); K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2] Tax=RIFCSPLOWO2_12_FULL_OD1_Falkowbacteria_42_13_curated
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGJ9_AMICL
anaerobic ribonucleoside-triphosphate reductase
rifoxya1_full_scaffold_24677_14
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5918..6631)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2R1X4_METFO rbh
Uncharacterized protein {ECO:0000313|EMBL:EKF86528.1}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacte
Displaying 14 items

View Taxonomy