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AB_1215_Bin_111.fna_scaffold_2356

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_111.fna_scaffold_2356_1
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

3..161
DNA (159bp) protein (53aa)
Rubrerythrin n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7V3S6_DESML
rubrerythrin
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_2356_2
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

173..556
DNA (384bp) protein (128aa)
Superoxide reductase n=6 Tax=Clostridium botulinum RepID=B1L213_CLOBM
desulfoferrodoxin
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_2356_3
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

728..940
DNA (213bp) protein (71aa)
Transcription factor CBF/NF-Y/histone domain-containing protein id=2175381 bin=GWA2_Bacteroidetes_42_15 species=nanoarchaeote Nst1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Nanoarchaeota tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
archaeal histone
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_2356_trna_1
unknown

Not on your lists

996..1069
DNA (74bp)
transferRNA Ala
AB_1215_Bin_111.fna_scaffold_2356_4
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

1089..2063
DNA (975bp) protein (325aa)
Putative Fe-S center protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TCS7_9EURY
iron-sulfur-binding protein
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_2356_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

2073..2477
DNA (405bp) protein (135aa)
Diadenosine tetraphosphate (Ap4A) hydrolase related HIT family hydrolase; K02503 Hit-like protein involved in cell-cycle regulation id=5803115 bin=OD1_GWC2_34_28 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
histidine triad (HIT) protein
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_2356_trna_2
unknown

Not on your lists

2501..2625
DNA (125bp)
transferRNA Met
AB_1215_Bin_111.fna_scaffold_2356_6
unknown

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2780..3055
DNA (276bp) protein (92aa)

This feature has no annotations

AB_1215_Bin_111.fna_scaffold_2356_trna_5
unknown

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comp(3057..3155)
DNA (99bp)
transferRNA Ser
AB_1215_Bin_111.fna_scaffold_2356_7
unknown

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comp(3165..3440)
DNA (276bp) protein (92aa)

This feature has no annotations

AB_1215_Bin_111.fna_scaffold_2356_8
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3503..4096)
DNA (594bp) protein (198aa)
Tax=CG_Desulfob_01
AB_1215_Bin_111.fna_scaffold_2356_9
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists


comp(4522..4833)
DNA (312bp) protein (104aa)
30S ribosomal protein S10 id=5800771 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps10p; 30S ribosomal protein S10
Tax=CG_Woesearch_03
AB_1215_Bin_111.fna_scaffold_2356_10
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(4911..6206)
DNA (1296bp) protein (432aa)
translation elongation factor 1a (ef-1a/ef-tu) (EC:2.7.7.4); K03231 elongation factor 1-alpha id=5043959 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Elongation factor 1-alpha
Tax=CG_Woesearch_01
AB_1215_Bin_111.fna_scaffold_2356_11

Not on your lists

comp(6287..8449)
DNA (2163bp) protein (721aa)
Elongation factor 2 {ECO:0000256|SAAS:SAAS00088569}; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;"
Elongation factor 2 id=5800773 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Elongation factor 2
AB_1215_Bin_111.fna_scaffold_2356_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(8459..8956)
DNA (498bp) protein (166aa)
nucleoside diphosphate kinase (EC:2.7.4.6)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035E6367
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_2356_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(8953..9141)
DNA (189bp) protein (63aa)
50S ribosomal protein L24; K02896 large subunit ribosomal protein L24e id=5045789 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rpl24E; 50S ribosomal protein L24E
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_2356_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(9147..9407)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003790FD9
30S ribosomal protein S28e
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_2356_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(9423..9764)
DNA (342bp) protein (114aa)
rpl7ae; 50S ribosomal protein L7; K02936 large subunit ribosomal protein L7Ae id=5043963 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L7Ae
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_2356_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

9908..10054
DNA (147bp) protein (49aa)
hypothetical protein id=1242327 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
hypothetical protein
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_2356_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(10075..10731)
DNA (657bp) protein (219aa)
UDP diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] id=5043940 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
undecaprenyl diphosphate synthase (EC:2.5.1.31)
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_2356_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

10811..11686
DNA (876bp) protein (292aa)
Peptidase A24A prepilin type IV id=5800557 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Peptidase A24A prepilin type IV
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_2356_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

11754..12314
DNA (561bp) protein (187aa)
XRE family transcriptional regulator id=5044639 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
putative transcription regulator, containing CBS protein
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_2356_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(12302..13024)
DNA (723bp) protein (241aa)
Phosphoesterase id=5800629 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_2356_21
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(13026..15617)
DNA (2592bp) protein (864aa)
ATP dependent helicase, lhr family; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] id=5049176 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DEAD/H associated protein
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_2356_22
unknown

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comp(15755..16120)
DNA (366bp) protein (122aa)

This feature has no annotations

AB_1215_Bin_111.fna_scaffold_2356_23
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(16237..16674)
DNA (438bp) protein (146aa)
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5043966 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S12
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_2356_24
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(16676..17095)
DNA (420bp) protein (140aa)
transcription elongation factor NusA-like protein; K02600 N utilization substance protein A id=5043967 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_2356_25
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(17095..17370)
DNA (276bp) protein (92aa)
NEQ179 id=5799591 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L30e
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_2356_26
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(17372..18508)
DNA (1137bp) protein (379aa)
DNA-directed RNA polymerase subunit A'' id=5800703 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit A''
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_2356_27
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(18525..21098)
DNA (2574bp) protein (858aa)
DNA-directed RNA polymerase subunit A' (EC:2.7.7.48); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5043970 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
Tax=CG_Woesearch_02
Displaying items 1-30 of 42 in total

View Taxonomy