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AB_1215_Bin_51.fna_scaffold_59257

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_51.fna_scaffold_59257_1
Methanobacterium lacus, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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1..510
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T889_METSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ08501.1}; TaxID=877455 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium lacus (strain AL-21).;"
AB_1215_Bin_51.fna_scaffold_59257_2
CG_Woesearch_02, Woesearchaeota, Archaea

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534..839
DNA (306bp) protein (102aa)
hypothetical protein
coiled-coil id=5241406 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Woesearch_02
AB_1215_Bin_51.fna_scaffold_59257_3
Salpingoeca rosetta, Salpingoeca, Choanoflagellida, Eukaryota

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comp(836..1756)
DNA (921bp) protein (307aa)
Protein-tyrosine-phosphatase {ECO:0000256|SAAS:SAAS00140653}; EC=3.1.3.48 {ECO:0000256|SAAS:SAAS00140653};; TaxID=946362 species="Eukaryota; Choanoflagellida; Salpingoecidae; Salpingoeca.;" source="Salpingoeca rosetta (strain ATCC 50818 / BSB-021).;"
Plasminogen n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) RepID=F2UJ71_SALR5
apu-1; Amylopullulanase (Apu)
AB_1215_Bin_51.fna_scaffold_59257_4
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(1809..2246)
DNA (438bp) protein (146aa)
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5043966 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S12
Tax=CG_Woesearch_02
AB_1215_Bin_51.fna_scaffold_59257_5
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(2248..2628)
DNA (381bp) protein (127aa)
transcription elongation factor NusA-like protein; K02600 N utilization substance protein A id=5043967 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
nusA; transcription elongation factor NusA-like protein
Tax=CG_Woesearch_02
AB_1215_Bin_51.fna_scaffold_59257_6

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comp(2666..2935)
DNA (270bp) protein (90aa)
NEQ179 id=5799591 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF60922.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
50S ribosomal protein L30e
AB_1215_Bin_51.fna_scaffold_59257_7
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(2941..4074)
DNA (1134bp) protein (378aa)
DNA-directed RNA polymerase subunit A'' id=5800703 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit A''
Tax=CG_Woesearch_02
AB_1215_Bin_51.fna_scaffold_59257_8

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comp(4080..5432)
DNA (1353bp) protein (451aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA-directed RNA polymerase subunit A' (EC:2.7.7.48); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5043970 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
Displaying 8 items

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