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AB_1215_Bin_59.fna_scaffold_1335

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_59.fna_scaffold_1335_1
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(3..206)
DNA (204bp) protein (68aa)
Putative uncharacterized protein id=4933086 bin=GWA2_Ignavibacteria-rel_35_8 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein
Tax=AR10
AB_1215_Bin_59.fna_scaffold_1335_2
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

499..774
DNA (276bp) protein (92aa)
Uncharacterized protein id=5799744 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Pacearch_04
AB_1215_Bin_59.fna_scaffold_1335_3
R_OD1_Nomurabacteria_42_19, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(862..3003)
DNA (2142bp) protein (714aa)
xerC; tyrosine recombinase xerC; K03733 integrase/recombinase XerC id=5802968 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
integrase/recombinase xerd, integrase/recombinase XerD
Tax=RIFCSPHIGHO2_02_FULL_OD1_Nomurabacteria_42_19_curated
AB_1215_Bin_59.fna_scaffold_1335_4
unknown

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3094..3321
DNA (228bp) protein (76aa)

This feature has no annotations

AB_1215_Bin_59.fna_scaffold_1335_5
unknown

Not on your lists

3431..3586
DNA (156bp) protein (52aa)

This feature has no annotations

AB_1215_Bin_59.fna_scaffold_1335_6
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(3833..4066)
DNA (234bp) protein (78aa)
hypothetical protein
transmembrane_regions id=5241564 bin=GW2011_AR10_complete species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_59.fna_scaffold_1335_7
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

4176..4331
DNA (156bp) protein (52aa)
hypothetical protein
id=5241627 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_59.fna_scaffold_1335_8
Scedosporium apiospermum, Scedosporium, Microascales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

4564..5280
DNA (717bp) protein (239aa)
PE repeat family protein n=1 Tax=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) RepID=D4ATZ4_ARTBC
Uncharacterized protein {ECO:0000313|EMBL:KEZ42562.1}; TaxID=563466 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Microascales; Microascaceae; Scedosporium.;" source="Scedosporium apiospermum.;"
cytochrome c1
AB_1215_Bin_59.fna_scaffold_1335_9
unknown

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5652..5936
DNA (285bp) protein (95aa)

This feature has no annotations

AB_1215_Bin_59.fna_scaffold_1335_10
GWF2_OD1_40_10, Parcubacteria, Bacteria

Not on your lists

5972..6361
DNA (390bp) protein (130aa)
metallopeptidase
metallopeptidase id=5241554 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Metallopeptidase {ECO:0000313|EMBL:KKR36707.1}; TaxID=1618964 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_40_10.;"
AB_1215_Bin_59.fna_scaffold_1335_11

Not on your lists

comp(6403..6708)
DNA (306bp) protein (102aa)
replication factor A1
single-stranded DNA-binding protein; K07466 replication factor A1 id=5241180 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Replication factor A1 {ECO:0000313|EMBL:AJF60171.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_59.fna_scaffold_1335_12
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7508..8395
DNA (888bp) protein (296aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036614FA
hypothetical protein
AB_1215_Bin_59.fna_scaffold_1335_13
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8465..9304
DNA (840bp) protein (280aa)
EAL domain proteni n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IML5_RHOCS
EAL domain-containing protein
EAL domain proteni {ECO:0000313|EMBL:ACI98594.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
AB_1215_Bin_59.fna_scaffold_1335_14
unknown

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9353..9862
DNA (510bp) protein (170aa)

This feature has no annotations

AB_1215_Bin_59.fna_scaffold_1335_15
Chelonia mydas, Chelonia, Testudines, Chordata, Metazoa

Not on your lists

9865..10911
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Chelonia mydas RepID=M7BXW7_CHEMY
Uncharacterized protein {ECO:0000313|EMBL:EMP42701.1}; TaxID=8469 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia.;" source="Chelonia mydas (Green sea-turtle) (Chelonia agassizi).;"
lipoprotein
AB_1215_Bin_59.fna_scaffold_1335_16

Not on your lists

comp(10956..11417)
DNA (462bp) protein (154aa)
nuclease SNase-like
nuclease (SNase-like) id=5240568 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Nuclease SNase-like {ECO:0000313|EMBL:AJF59561.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_59.fna_scaffold_1335_17
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

11763..11963
DNA (201bp) protein (67aa)
topB; putative DNA topoisomerase 3 (EC:5.99.1.2) id=18316128 bin=Nanosalinarum tax=Nanosalinarum
Topoisomerase DNA binding C4 zinc finger {ECO:0000313|EMBL:EGQ39902.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
AB_1215_Bin_59.fna_scaffold_1335_18
RIFOXYC2_FULL_PER-ii_58_32_curated, PER-ii, Bacteria

Not on your lists

comp(12021..12725)
DNA (705bp) protein (235aa)
transmembrane_regions 7..25 id=92300 bin=ACD61 species=ACD61 genus=ACD61 taxon_order=ACD61 taxon_class=ACD61 phylum=OP11 tax=ACD61 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFOXYC2_FULL_PER-ii_58_32_curated
AB_1215_Bin_59.fna_scaffold_1335_19
unknown

Not on your lists

comp(12820..12942)
DNA (123bp) protein (41aa)

This feature has no annotations

AB_1215_Bin_59.fna_scaffold_1335_20
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12990..13253
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZH65_9CLOT
endo/excinuclease domain-containing protein
Endo/excinuclease domain protein {ECO:0000313|EMBL:ABK60636.1}; TaxID=386415 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi (strain NT).;"
AB_1215_Bin_59.fna_scaffold_1335_21
Methanobacterium lacus, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

13281..13898
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T6S5_METSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ08308.1}; TaxID=877455 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium lacus (strain AL-21).;"
AB_1215_Bin_59.fna_scaffold_1335_22
CG_Micra_04, Micraarchaeota, Archaea

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comp(13925..14680)
DNA (756bp) protein (252aa)
UPI0003D1C31D related cluster n=1 Tax=unknown RepID=UPI0003D1C31D
ABC-type polysaccharide/polyol phosphate export systems, permease component
Tax=CG_Micra_04
AB_1215_Bin_59.fna_scaffold_1335_23
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(14712..15710)
DNA (999bp) protein (333aa)
ABC transporter, ATPase subunit n=1 Tax=Methanococcoides burtonii (strain DSM 6242) RepID=Q12YU3_METBU id=5103542 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ABC transporter, ATPase subunit
Tax=CG_Micra_04
AB_1215_Bin_59.fna_scaffold_1335_24
unknown

Not on your lists

15859..16737
DNA (879bp) protein (293aa)

This feature has no annotations

AB_1215_Bin_59.fna_scaffold_1335_25
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

16877..17221
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7U112_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMR75686.1}; TaxID=1242866 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-540-F20.;"
AB_1215_Bin_59.fna_scaffold_1335_26
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

17267..17458
DNA (192bp) protein (64aa)
Putative transcriptional regulator n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TGP8_9EURY
putative HTH-type transcriptional regulator
Tax=CG_Aenigma_01
AB_1215_Bin_59.fna_scaffold_1335_27
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17483..18013)
DNA (531bp) protein (177aa)
Rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:AKB83344.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
AB_1215_Bin_59.fna_scaffold_1335_28
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

Not on your lists

18161..18331
DNA (171bp) protein (57aa)
Uncharacterized protein (Fragment) n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TY35_9EURY
hypothetical protein
Tax=RBG_13_Euryarchaeota_31_8_curated
AB_1215_Bin_59.fna_scaffold_1335_29

Not on your lists

comp(18550..19197)
DNA (648bp) protein (216aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55751.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
hypothetical protein
transmembrane_regions id=5241251 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
AB_1215_Bin_59.fna_scaffold_1335_30
unknown

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comp(19293..19424)
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying items 1-30 of 60 in total

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