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AB_1215_Bin_59.fna_scaffold_2800

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_59.fna_scaffold_2800_1

Not on your lists

comp(63..287)
DNA (225bp) protein (75aa)
ribonuclease Z (EC:3.1.26.11)
ribonuclease Z; K00784 ribonuclease Z [EC:3.1.26.11] id=5241752 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_59.fna_scaffold_2800_2

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comp(305..934)
DNA (630bp) protein (210aa)
ribonuclease Z (EC:3.1.26.11)
ribonuclease Z; K00784 ribonuclease Z [EC:3.1.26.11] id=5241752 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_59.fna_scaffold_2800_3
CG_Micra_04, Micraarchaeota, Archaea

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1045..2061
DNA (1017bp) protein (339aa)
Lon-like protein ATP-dependent protease (EC:3.4.21.-)
ATP-dependent protease La; K04076 Lon-like ATP-dependent protease [EC:3.4.21.-] id=5241757 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Micra_04
AB_1215_Bin_59.fna_scaffold_2800_4
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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2228..3331
DNA (1104bp) protein (368aa)
Pab lon intein n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZM31_THELI
Pab lon intein
Pab lon intein {ECO:0000313|EMBL:EHR78975.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 /; NS-C).;"
AB_1215_Bin_59.fna_scaffold_2800_5

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3405..4835
DNA (1431bp) protein (477aa)
Lon-like protein ATP-dependent protease (EC:3.4.21.-)
ATP-dependent protease La; K04076 Lon-like ATP-dependent protease [EC:3.4.21.-] id=5241757 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Lon-like protein ATP-dependent protease {ECO:0000313|EMBL:AJF60748.1}; EC=3.4.21.- {ECO:0000313|EMBL:AJF60748.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_59.fna_scaffold_2800_6
AR10, Diapherotrites, DPANN, Archaea

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comp(4881..6098)
DNA (1218bp) protein (406aa)
hypothetical protein
hypothetical protein; K08975 putative membrane protein id=5241758 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_59.fna_scaffold_2800_7

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6190..7158
DNA (969bp) protein (323aa)
hypothetical protein
Mechanosensory protein, putative id=5241759 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60750.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_59.fna_scaffold_2800_8

Not on your lists

comp(7357..8262)
DNA (906bp) protein (302aa)
hypothetical protein
Uncharacterized membrane protein id=5241760 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60751.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_59.fna_scaffold_2800_9
Methanobrevibacter sp. AbM4, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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8361..8930
DNA (570bp) protein (190aa)
Exosome complex RNA-binding protein Csl4 n=1 Tax=Methanobrevibacter sp. AbM4 RepID=R9SM43_9EURY
exosome complex RNA-binding protein Csl4
Exosome complex component Csl4 {ECO:0000256|HAMAP-Rule:MF_00975}; TaxID=224719 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter sp. AbM4.;"
AB_1215_Bin_59.fna_scaffold_2800_10
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

9010..9282
DNA (273bp) protein (91aa)
DNA-directed RNA polymerase subunit L (EC:2.7.7.6)
DNA-directed RNA polymerase subunit L; K03056 DNA-directed RNA polymerase subunit L [EC:2.7.7.6] id=5241762 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_59.fna_scaffold_2800_11
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

9384..10145
DNA (762bp) protein (254aa)
signal peptidase, endoplasmic reticulum-type (EC:3.4.-.-)
signal peptidase subunit; K13280 signal peptidase, endoplasmic reticulum-type [EC:3.4.-.-] id=5241763 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_59.fna_scaffold_2800_12
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

10218..10961
DNA (744bp) protein (248aa)
proliferating cell nuclear antigen
proliferating-cell nuclear antigen Pol30; K04802 proliferating cell nuclear antigen id=5241764 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_59.fna_scaffold_2800_13
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

10995..11816
DNA (822bp) protein (274aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-N05 RepID=UPI00035D86C2
Tax=RBG_13_Bathyarchaeota_46_16b_curated
AB_1215_Bin_59.fna_scaffold_2800_14

Not on your lists

11921..12283
DNA (363bp) protein (121aa)
potassium channel protein id=18248811 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Potassium channel protein {ECO:0000313|EMBL:KHO47646.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
Potassium channel protein
AB_1215_Bin_59.fna_scaffold_2800_15

Not on your lists

12368..13090
DNA (723bp) protein (241aa)
proliferating cell nuclear antigen
proliferating cell nuclear antigen PcnA; K04802 proliferating cell nuclear antigen id=5241766 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA polymerase sliding clamp {ECO:0000256|HAMAP-Rule:MF_00317, ECO:0000256|RuleBase:RU003673}; Proliferating cell nuclear antigen homolog {ECO:0000256|HAMAP-Rule:MF_00317}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_59.fna_scaffold_2800_16

Not on your lists

13277..14350
DNA (1074bp) protein (358aa)
priL; DNA primase large subunit (EC:2.7.7.-)
priL; DNA primase, large subunit (EC:2.7.7.-); K02685 DNA primase large subunit [EC:2.7.7.-] id=5241767 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA primase large subunit PriL {ECO:0000256|HAMAP-Rule:MF_00701}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_59.fna_scaffold_2800_17
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

14350..15597
DNA (1248bp) protein (416aa)
putative DNA primase, small subunit; K02683 DNA primase [EC:2.7.7.-] id=5241769 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein
Tax=AR10
AB_1215_Bin_59.fna_scaffold_2800_18
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

15594..16139
DNA (546bp) protein (182aa)
hypothetical protein
hypothetical protein; K09723 hypothetical protein id=5241770 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_59.fna_scaffold_2800_19

Not on your lists

16147..16344
DNA (198bp) protein (66aa)
small subunit ribosomal protein S27e
30S ribosomal protein S27; K02978 small subunit ribosomal protein S27e id=5241771 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_59.fna_scaffold_2800_20
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

16341..17120
DNA (780bp) protein (260aa)
translation initiation factor 2 subunit 1
translation initiation factor 2 subunit alpha; K03237 translation initiation factor 2 subunit 1 id=5241772 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_59.fna_scaffold_2800_21
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

17122..17898
DNA (777bp) protein (259aa)
hypothetical protein
hypothetical protein; K07159 id=5241773 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_59.fna_scaffold_2800_22
unknown

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comp(17902..18816)
DNA (915bp) protein (305aa)

This feature has no annotations

AB_1215_Bin_59.fna_scaffold_2800_23
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(18855..20123)
DNA (1269bp) protein (423aa)
hypothetical protein
hypothetical protein id=5241776 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Displaying 23 items

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