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AB_1215_Bin_59.fna_scaffold_4144

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_59.fna_scaffold_4144_trna_1
unknown

Not on your lists

comp(1..75)
DNA (75bp)
transferRNA Glu
AB_1215_Bin_59.fna_scaffold_4144_1
unknown

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149..682
DNA (534bp) protein (178aa)

This feature has no annotations

AB_1215_Bin_59.fna_scaffold_4144_2
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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748..912
DNA (165bp) protein (55aa)
# 8830 # 8991 # 1 # ;gc_cont=0.444 id=18311068 bin=Haloredivivus tax=Haloredivivus
Uncharacterized protein {ECO:0000313|EMBL:EHK02684.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
AB_1215_Bin_59.fna_scaffold_4144_3
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

Not on your lists

comp(915..1859)
DNA (945bp) protein (315aa)
thiamine-phosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] id=5094850 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
thiamine-monophosphate kinase (EC:2.7.4.16)
Tax=RBG_13_Euryarchaeota_31_8_curated
AB_1215_Bin_59.fna_scaffold_4144_4
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

comp(1863..2948)
DNA (1086bp) protein (362aa)
Phosphomethylpyrimidine synthase n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CGA8_THEYO
ThiC; thiamine biosynthesis protein ThiC
Tax=CG_Elusi_03
AB_1215_Bin_59.fna_scaffold_4144_5

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comp(3101..3721)
DNA (621bp) protein (207aa)
Thiamine-phosphate synthase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=THIE_METAC
Marine sediment metagenome DNA, contig: S12H4_C01944 {ECO:0000313|EMBL:GAI65690.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
thiE; thiamine-phosphate pyrophosphorylase
AB_1215_Bin_59.fna_scaffold_4144_6
CG_Omnitr_03, Omnitrophica, Bacteria

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comp(3750..4550)
DNA (801bp) protein (267aa)
hydroxyethylthiazole kinase (EC:2.7.1.50)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00037B0D43
Tax=CG_Omnitr_03
AB_1215_Bin_59.fna_scaffold_4144_7

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4625..5449
DNA (825bp) protein (275aa)
4-hydroxybenzoate octaprenyltransferase (EC:2.5.1.-)
prenyltransferase UbiA; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] id=5240702 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
4-hydroxybenzoate octaprenyltransferase {ECO:0000313|EMBL:AJF59695.1}; EC=2.5.1.- {ECO:0000313|EMBL:AJF59695.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_59.fna_scaffold_4144_8

Not on your lists

5738..6661
DNA (924bp) protein (308aa)
hypothetical protein
hypothetical protein; K07728 putative transcriptional regulator id=5240701 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Putative HTH-type transcriptional regulatory protein QT03_C0001G0187 {ECO:0000256|HAMAP-Rule:MF_00584}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_59.fna_scaffold_4144_9

Not on your lists

comp(6681..7706)
DNA (1026bp) protein (342aa)
flap endonuclease-1 (EC:3.-.-.-)
Flap structure-specific endonuclease; K04799 flap endonuclease-1 [EC:3.-.-.-] id=5240697 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_59.fna_scaffold_4144_10
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

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7778..8182
DNA (405bp) protein (135aa)
Putative transcription factor, MBF1 like protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HQL5_ACIS0
putative transcription factor, MBF1 like protein
Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
AB_1215_Bin_59.fna_scaffold_4144_11

Not on your lists

8249..9745
DNA (1497bp) protein (499aa)
peptidase M50
peptidase M50 id=5240970 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Peptidase M50 {ECO:0000313|EMBL:AJF59961.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_59.fna_scaffold_4144_12

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comp(9790..10863)
DNA (1074bp) protein (358aa)
cell division protein FtsZ
cell division protein FtsZ; K03531 cell division protein FtsZ id=5240969 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_59.fna_scaffold_4144_13
unknown

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comp(11166..11609)
DNA (444bp) protein (148aa)

This feature has no annotations

AB_1215_Bin_59.fna_scaffold_4144_14
unknown

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12053..12883
DNA (831bp) protein (277aa)

This feature has no annotations

AB_1215_Bin_59.fna_scaffold_4144_15
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

Not on your lists

12953..14416
DNA (1464bp) protein (488aa)
Radical SAM domain protein n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AVY1_FRADG
Radical SAM domain protein {ECO:0000313|EMBL:KKQ17638.1}; TaxID=1618331 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
hypothetical protein
AB_1215_Bin_59.fna_scaffold_4144_16
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(14454..15569)
DNA (1116bp) protein (372aa)
CLI_3235-class bacteriocin maturation radical SAM enzyme n=2 Tax=Parabacteroides RepID=E1Z177_9PORP
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
AB_1215_Bin_59.fna_scaffold_4144_17
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15662..16645
DNA (984bp) protein (328aa)
homoserine kinase (EC:2.7.1.39)
Homoserine kinase n=1 Tax=Marinomonas sp. (strain MWYL1) RepID=A6VRZ6_MARMS
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
AB_1215_Bin_59.fna_scaffold_4144_18
unknown

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16703..17767
DNA (1065bp) protein (355aa)

This feature has no annotations

AB_1215_Bin_59.fna_scaffold_4144_19
Vibrio sp. B183, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17802..18275)
DNA (474bp) protein (158aa)
histone acetyltransferase n=1 Tax=Vibrio coralliilyticus RepID=UPI000312E68C
Histone acetyltransferase {ECO:0000313|EMBL:KFI12451.1}; TaxID=1526762 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. B183.;"
histone acetyltransferase
AB_1215_Bin_59.fna_scaffold_4144_20
Methanotorris formicicus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(18332..20269)
DNA (1938bp) protein (646aa)
Putative uncharacterized protein n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1KXA6_9EURY
Putative uncharacterized protein {ECO:0000313|EMBL:EHP88537.1}; TaxID=647171 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Methanotorris formicicus Mc-S-70.;"
hypothetical protein
AB_1215_Bin_59.fna_scaffold_4144_21
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20257..21492)
DNA (1236bp) protein (412aa)
Pyridoxal-dependent decarboxylase domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RPV5_9FIRM
Pyridoxal-dependent decarboxylase domain protein {ECO:0000313|EMBL:ERK52747.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
AB_1215_Bin_59.fna_scaffold_4144_22
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21493..21873)
DNA (381bp) protein (127aa)
Adenosylmethionine decarboxylase {ECO:0000256|SAAS:SAAS00093036}; EC=4.1.1.50 {ECO:0000256|SAAS:SAAS00093036};; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI0003694453
S-adenosylmethionine decarboxylase
AB_1215_Bin_59.fna_scaffold_4144_23
unknown

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22102..22266
DNA (165bp) protein (55aa)

This feature has no annotations

AB_1215_Bin_59.fna_scaffold_4144_24
unknown

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22247..22912
DNA (666bp) protein (222aa)

This feature has no annotations

AB_1215_Bin_59.fna_scaffold_4144_25
AR11, Woesearchaeaota, DPANN, Archaea

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comp(23055..24074)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) RepID=B9MSA9_CALBD
hypothetical protein
Tax=AR11
AB_1215_Bin_59.fna_scaffold_4144_26
unknown

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comp(24052..24165)
DNA (114bp) protein (38aa)

This feature has no annotations

AB_1215_Bin_59.fna_scaffold_4144_27
unknown

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24269..24934
DNA (666bp) protein (222aa)

This feature has no annotations

AB_1215_Bin_59.fna_scaffold_4144_28
CG_CPR10_02, CG_CPR10, Bacteria

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25159..26205
DNA (1047bp) protein (349aa)
Tax=CG_CPR10_02
AB_1215_Bin_59.fna_scaffold_4144_29

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26262..27215
DNA (954bp) protein (318aa)
hypothetical protein id=5046788 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45976.1}; Flags: Fragment;; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
Displaying items 1-30 of 32 in total

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