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Meg19_1012_Bin_325_scaffold_9075

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg19_1012_Bin_325_scaffold_9075_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(1..207)
DNA (207bp) protein (69aa)
Transcriptional regulator, AsnC family id=5800646 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RBG_13_Woesearchaeota_36_6_curated
Meg19_1012_Bin_325_scaffold_9075_2
unknown

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369..1982
DNA (1614bp) protein (538aa)

This feature has no annotations

Meg19_1012_Bin_325_scaffold_9075_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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1979..2626
DNA (648bp) protein (216aa)
thyA; thymidylate synthase (EC:2.1.1.45)
Putative thymidylate synthase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=TYSY_METBU
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg19_1012_Bin_325_scaffold_9075_4

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2715..3107
DNA (393bp) protein (131aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase n=1 Tax=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) RepID=A6UTN8_META3
Meg19_1012_Bin_325_scaffold_9075_5
unknown

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3104..3205
DNA (102bp) protein (34aa)

This feature has no annotations

Meg19_1012_Bin_325_scaffold_9075_6
unknown

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3207..4721
DNA (1515bp) protein (505aa)

This feature has no annotations

Meg19_1012_Bin_325_scaffold_9075_7
unknown

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4685..5650
DNA (966bp) protein (322aa)

This feature has no annotations

Meg19_1012_Bin_325_scaffold_9075_8

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comp(5691..6749)
DNA (1059bp) protein (353aa)
Putative uncharacterized protein n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NGY9_METST id=5103806 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF63084.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Meg19_1012_Bin_325_scaffold_9075_9
AR20, Woesearchaeaota, DPANN, Archaea

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comp(6746..7372)
DNA (627bp) protein (209aa)
hypothetical protein
id=5103829 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
Meg19_1012_Bin_325_scaffold_9075_trna_1
unknown

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comp(7444..7515)
DNA (72bp)
transferRNA Gly
Meg19_1012_Bin_325_scaffold_9075_10
unknown

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comp(7554..8198)
DNA (645bp) protein (215aa)

This feature has no annotations

Meg19_1012_Bin_325_scaffold_9075_11
CG_Woesearch_02, Woesearchaeota, Archaea

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8284..9153
DNA (870bp) protein (290aa)
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF id=5045761 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Protein-export membrane protein SecF
Tax=CG_Woesearch_02
Meg19_1012_Bin_325_scaffold_9075_12
AR17, Woesearchaeaota, DPANN, Archaea

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9146..10876
DNA (1731bp) protein (577aa)
SecD/SecF/SecDF export membrane protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEL5_9EURY id=5102895 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SecD/SecF/SecDF export membrane protein
Tax=AR17
Meg19_1012_Bin_325_scaffold_9075_13
RLO_WOR_2_51_24, WOR-2, Bacteria

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comp(10882..11580)
DNA (699bp) protein (233aa)
NEQ025 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MH0_NANEQ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
Meg19_1012_Bin_325_scaffold_9075_14
Clostridium sp. CAG:1000, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11867..12445
DNA (579bp) protein (193aa)
ksgA; dimethyladenosine transferase KsgA (EC:2.1.1.-)
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Clostridium sp. CAG:1000 RepID=R5A1E3_9CLOT
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000313|EMBL:CCX36558.1}; TaxID=1262768 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1000.;"
Meg19_1012_Bin_325_scaffold_9075_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12488..13009)
DNA (522bp) protein (174aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Adenine phosphoribosyltransferase n=212 Tax=Clostridium difficile RepID=APT_CLOD6
apt; adenine phosphoribosyltransferase
Meg19_1012_Bin_325_scaffold_9075_16
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(12993..14450)
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00038087F2
thymidine phosphorylase
Tax=CG_Woesearch_02
Meg19_1012_Bin_325_scaffold_9075_17
unknown

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comp(14447..15532)
DNA (1086bp) protein (362aa)

This feature has no annotations

Meg19_1012_Bin_325_scaffold_9075_18
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(15529..16737)
DNA (1209bp) protein (403aa)
Tax=CG_Delta_07
Meg19_1012_Bin_325_scaffold_9075_19
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(16778..17131)
DNA (354bp) protein (118aa)
AsnC family transcriptional regulator id=5045866 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
AsnC family transcriptional regulator
Tax=CG_Woesearch_03
Displaying 20 items

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