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Meg19_1012_Bin_325_scaffold_12289

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg19_1012_Bin_325_scaffold_12289_1

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1..909
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035CD017
Translation-associated GTPase {ECO:0000313|EMBL:AJF61651.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
Meg19_1012_Bin_325_scaffold_12289_2

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906..1877
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003824DB2
DNA-binding/iron metalloprotein/AP endonuclease, tRNA threonylcarbamoyladenosine biosynthesis protein {ECO:0000313|EMBL:KHO52212.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
putative bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein
Meg19_1012_Bin_325_scaffold_12289_3
unknown

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2196..2396
DNA (201bp) protein (67aa)

This feature has no annotations

Meg19_1012_Bin_325_scaffold_12289_4

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2521..3651
DNA (1131bp) protein (377aa)
Glycosyl transferase group 1 n=1 Tax=Leptonema illini DSM 21528 RepID=H2CGX2_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:KKM15135.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
glycosyl transferase
Meg19_1012_Bin_325_scaffold_12289_5
unknown

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3696..4583
DNA (888bp) protein (296aa)

This feature has no annotations

Meg19_1012_Bin_325_scaffold_12289_6
unknown

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4603..5193
DNA (591bp) protein (197aa)

This feature has no annotations

Meg19_1012_Bin_325_scaffold_12289_7

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5195..5518
DNA (324bp) protein (108aa)
Uncharacterized protein id=5799963 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61294.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
Meg19_1012_Bin_325_scaffold_12289_8
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

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comp(5554..6468)
DNA (915bp) protein (305aa)
thioredoxin reductase NADPH (EC:1.8.1.9)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AQC1_9BACT
Tax=RBG_16_Pacearchaeota_35_8_curated
Meg19_1012_Bin_325_scaffold_12289_9

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6587..7732
DNA (1146bp) protein (382aa)
Glycosyltransferase, group 2 family protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8EZU2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KKN71691.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
glycosyltransferase
Meg19_1012_Bin_325_scaffold_12289_10

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comp(7719..8933)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HKD5_PYRSN id=5102913 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62194.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Meg19_1012_Bin_325_scaffold_12289_trna_1
unknown

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9040..9112
DNA (73bp)
transferRNA Val
Meg19_1012_Bin_325_scaffold_12289_11
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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9189..10448
DNA (1260bp) protein (420aa)
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NDB1_DESAR
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg19_1012_Bin_325_scaffold_12289_12
AR17, Woesearchaeaota, DPANN, Archaea

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comp(10449..11039)
DNA (591bp) protein (197aa)
30S ribosomal protein S7 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS7_NANEQ id=5103767 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S7
Tax=AR17
Meg19_1012_Bin_325_scaffold_12289_13

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comp(11036..11473)
DNA (438bp) protein (146aa)
30S ribosomal protein S12 n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RS12_METKA id=5103768 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;"
30S ribosomal protein S12
Meg19_1012_Bin_325_scaffold_12289_14
unknown

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comp(11487..11690)
DNA (204bp) protein (68aa)

This feature has no annotations

Meg19_1012_Bin_325_scaffold_12289_15
unknown

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comp(11705..11914)
DNA (210bp) protein (70aa)

This feature has no annotations

Meg19_1012_Bin_325_scaffold_12289_16

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comp(11856..12110)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036BD095
Marine sediment metagenome DNA, contig: S01H1_S20770 {ECO:0000313|EMBL:GAG19745.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
50S ribosomal protein L30e
Meg19_1012_Bin_325_scaffold_12289_17

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comp(12100..13239)
DNA (1140bp) protein (380aa)
DNA-directed RNA polymerase subunit A {ECO:0000313|EMBL:KHO52600.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO52600.1};; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6); K03042 DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] id=5044120 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit A''
Meg19_1012_Bin_325_scaffold_12289_18
AR20, Woesearchaeaota, DPANN, Archaea

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comp(13236..15797)
DNA (2562bp) protein (854aa)
DNA-directed RNA polymerase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYR8_METFV id=5103777 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase
Tax=AR20
Meg19_1012_Bin_325_scaffold_12289_19

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comp(15799..17604)
DNA (1806bp) protein (602aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
DNA-directed RNA polymerase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYR9_METFV id=5103778 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase
Meg19_1012_Bin_325_scaffold_12289_20

Not on your lists

comp(17606..19093)
DNA (1488bp) protein (496aa)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:KHO52597.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO52597.1};; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
DNA-directed RNA polymerase n=6 Tax=Thermococcus RepID=Q5JE32_PYRKO id=5103779 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase
Meg19_1012_Bin_325_scaffold_12289_21
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(19086..19322)
DNA (237bp) protein (79aa)
DNA-directed RNA polymerase, subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=547558 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalophilus.;" source="Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP).;"
DNA-directed RNA polymerase subunit H n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EA54_METMS
Meg19_1012_Bin_325_scaffold_12289_trna_4
unknown

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comp(19334..19409)
DNA (76bp)
transferRNA Lys
Meg19_1012_Bin_325_scaffold_12289_trna_3
unknown

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comp(19412..19485)
DNA (74bp)
transferRNA Asp
Meg19_1012_Bin_325_scaffold_12289_trna_2
unknown

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comp(19662..19786)
DNA (125bp)
transferRNA Tyr
Meg19_1012_Bin_325_scaffold_12289_22
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

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comp(19835..21238)
DNA (1404bp) protein (468aa)
hypothetical protein
id=5102943 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
Meg19_1012_Bin_325_scaffold_12289_23
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(21293..21841)
DNA (549bp) protein (183aa)
Uncharacterized protein MJ0062 id=5799697 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Sua5/YciO/YrdC/YwlC family protein
Tax=CG_Woesearch_02
Meg19_1012_Bin_325_scaffold_12289_24
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

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22053..23534
DNA (1482bp) protein (494aa)
Putative proteasome component n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLF1_9BACT
proteasome component
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
Meg19_1012_Bin_325_scaffold_12289_25

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comp(23552..25594)
DNA (2043bp) protein (681aa)
SMC domain protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5V4_NITMS id=5103605 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SMC protein
SMC protein {ECO:0000313|EMBL:AJF62886.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Meg19_1012_Bin_325_scaffold_12289_26

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comp(25591..26013)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035CF06F
Metallophosphoesterase {ECO:0000313|EMBL:KHO51698.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Metallophosphoesterase
Displaying 30 items

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