ggKbase home page

Meg22_1012_Bin_305_scaffold_32580

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1012_Bin_305_scaffold_32580_1

Not on your lists

169..1221
DNA (1053bp) protein (351aa)
Marine sediment metagenome DNA, contig: S12H4_S25138 {ECO:0000313|EMBL:GAJ21052.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg22_1012_Bin_305_scaffold_32580_2
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(1223..1942)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003621DCB
DNA-directed RNA polymerase subunit D
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1012_Bin_305_scaffold_32580_3
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


comp(1943..2350)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Tetranychus urticae RepID=T1K9A0_TETUR
30S ribosomal protein S11
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1012_Bin_305_scaffold_32580_4
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


comp(2343..2828)
DNA (486bp) protein (162aa)
30S ribosomal protein S4 id=4922289 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
30S ribosomal protein S4
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1012_Bin_305_scaffold_32580_5
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(2828..3301)
DNA (474bp) protein (158aa)
30S ribosomal protein S13 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS13_NANEQ id=5103690 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S13
Tax=AR19
Meg22_1012_Bin_305_scaffold_32580_6
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(3303..3839)
DNA (537bp) protein (179aa)
hypothetical protein; K07572 putative nucleotide binding protein id=5051518 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-binding protein
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1012_Bin_305_scaffold_32580_7
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(3845..4150)
DNA (306bp) protein (102aa)
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1012_Bin_305_scaffold_32580_8

Not on your lists


comp(4152..4412)
DNA (261bp) protein (87aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL64656.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
50S ribosomal protein L21e
Meg22_1012_Bin_305_scaffold_32580_9

Not on your lists

comp(4450..4647)
DNA (198bp) protein (66aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL64657.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg22_1012_Bin_305_scaffold_32580_10
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(4763..5974)
DNA (1212bp) protein (404aa)
hypothetical protein; K02004 putative ABC transport system permease protein id=5046030 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=CG_Pacearch_04
Meg22_1012_Bin_305_scaffold_32580_11
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(5976..6815)
DNA (840bp) protein (280aa)
hypothetical protein
id=5103794 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=RBG_16_Pacearchaeota_35_8_curated
Meg22_1012_Bin_305_scaffold_32580_12
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(6842..7531)
DNA (690bp) protein (230aa)
ABC transport system protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUY6_9BACT id=5103795 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ABC transport system protein
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1012_Bin_305_scaffold_32580_13
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists


7701..7841
DNA (141bp) protein (47aa)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6)
DNA-directed RNA polymerase subunit N n=1 Tax=Thermosphaera aggregans (strain DSM 11486 / M11TL) RepID=D5U3F0_THEAM
Tax=AR6
Meg22_1012_Bin_305_scaffold_32580_14
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

7862..8593
DNA (732bp) protein (244aa)
id=5048311 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1012_Bin_305_scaffold_32580_15
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(8598..8738)
DNA (141bp) protein (47aa)
Tax=AR13
Meg22_1012_Bin_305_scaffold_32580_16
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8885..9823
DNA (939bp) protein (313aa)
Similar to GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase/4-reductase (GDP-fucose synthetase) id=1708305 bin=GWB2_Proteobacteria_55_19 species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
nucleoside-diphosphate-sugar epimerase
Tax=GWB2_Deltaproteobacteria_55_19_curated
Meg22_1012_Bin_305_scaffold_32580_17
Nautilia profundicola, Nautilia, Nautiliales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9810..10001)
DNA (192bp) protein (64aa)
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=598659 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Nautiliales; Nautiliaceae; Nautilia.;" source="Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH).;"
GDP-mannose 4,6-dehydratase n=1 Tax=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) RepID=B9L6R0_NAUPA
Displaying 17 items

View Taxonomy