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Meg22_1214_Bin_231_scaffold_12333

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1214_Bin_231_scaffold_12333_1
AR10, Diapherotrites, DPANN, Archaea

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3..242
DNA (240bp) protein (80aa)
translation initiation factor IF-2, translation initiation factor 5B
InfB_2; translation initiation factor IF-2; K03243 translation initiation factor 5B id=5241395 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg22_1214_Bin_231_scaffold_12333_2
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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239..667
DNA (429bp) protein (143aa)
30S ribosomal protein S6e n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IAM3_METCZ
rps6e; 30D ribosomal protein S6E
30S ribosomal protein S6e {ECO:0000256|HAMAP-Rule:MF_00512, ECO:0000256|SAAS:SAAS00018829}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 /; HZ254).;"
Meg22_1214_Bin_231_scaffold_12333_3

Not on your lists


684..1904
DNA (1221bp) protein (407aa)
Translation initiation factor 2 subunit 3 {ECO:0000313|EMBL:KHO55203.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
translation initiation factor 2 subunit 3
translation initiation factor 2 subunit gamma (aeif-2g); K03242 translation initiation factor 2 subunit 3 id=5241397 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Meg22_1214_Bin_231_scaffold_12333_4
AR10, Diapherotrites, DPANN, Archaea

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1888..2268
DNA (381bp) protein (127aa)
PilT protein
PilT domain protein id=5241398 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg22_1214_Bin_231_scaffold_12333_5

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2269..2910
DNA (642bp) protein (214aa)
DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
DNA-directed RNA polymerase (EC:2.7.7.6); K03049 DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] id=5241399 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:AJF60390.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AJF60390.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg22_1214_Bin_231_scaffold_12333_6
AR10, Diapherotrites, DPANN, Archaea

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2907..3104
DNA (198bp) protein (66aa)
transcription elongation factor Spt4/RpoE2, zinc finger protein, DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
Spt4; transcription elongation factor Spt4/RpoE2, zinc finger protein; K03050 DNA-directed RNA polymerase subunit E" [EC:2.7.7.6] id=5241400 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg22_1214_Bin_231_scaffold_12333_7
CG_Micra_05, Micraarchaeota, Archaea

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3109..3426
DNA (318bp) protein (106aa)
30S ribosomal protein S24E, small subunit ribosomal protein S24e
rps24e; 30S ribosomal protein S24E; K02974 small subunit ribosomal protein S24e id=5241401 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Micra_05
Meg22_1214_Bin_231_scaffold_12333_8
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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3432..3608
DNA (177bp) protein (59aa)
30S ribosomal protein S27ae n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=RS27A_THEKO
30S ribosomal protein S27
30S ribosomal protein S27ae {ECO:0000256|HAMAP-Rule:MF_00777}; TaxID=1343739 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY20341.;"
Meg22_1214_Bin_231_scaffold_12333_9
AR10, Diapherotrites, DPANN, Archaea

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3611..4156
DNA (546bp) protein (182aa)
CAAX protease self-immunity
CAAX protease self-immunity id=5241403 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg22_1214_Bin_231_scaffold_12333_10

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4165..5139
DNA (975bp) protein (325aa)
DNA-binding/iron metalloprotein/AP endonuclease, tRNA threonylcarbamoyladenosine biosynthesis protein
gcp; DNA-binding/iron metalloprotein/AP endonuclease; K15900 tRNA threonylcarbamoyladenosine biosynthesis protein id=5241405 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA-binding/iron metalloprotein/AP endonuclease, tRNA threonylcarbamoyladenosine biosynthesis protein {ECO:0000313|EMBL:AJF60396.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg22_1214_Bin_231_scaffold_12333_11
unknown

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comp(5140..5316)
DNA (177bp) protein (59aa)

This feature has no annotations

Meg22_1214_Bin_231_scaffold_12333_12
unknown

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comp(5395..6015)
DNA (621bp) protein (207aa)

This feature has no annotations

Meg22_1214_Bin_231_scaffold_12333_13

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6103..6702
DNA (600bp) protein (200aa)
Bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein {ECO:0000313|EMBL:KHO54946.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KHO54946.1};; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein (EC:2.7.11.1)
O-sialoglycoprotein endopeptidase (EC:2.7.11.1 3.4.24.57); K15904 bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein [EC:2.7.11.1] id=5241414 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Meg22_1214_Bin_231_scaffold_12333_14
Thermococcus cleftensis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


6812..7225
DNA (414bp) protein (138aa)
30S ribosomal protein S15 n=1 Tax=Thermococcus sp. CL1 RepID=I3ZRP4_9EURY
30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343}; TaxID=163003 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus cleftensis.;"
Meg22_1214_Bin_231_scaffold_12333_15
unknown

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7230..7370
DNA (141bp) protein (47aa)

This feature has no annotations

Meg22_1214_Bin_231_scaffold_12333_16

Not on your lists


7360..7950
DNA (591bp) protein (197aa)
small subunit ribosomal protein S3Ae
30S ribosomal protein S3Ae; K02984 small subunit ribosomal protein S3Ae id=5241417 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
30S ribosomal protein S3Ae {ECO:0000256|HAMAP-Rule:MF_00359, ECO:0000256|SAAS:SAAS00194211}; Ribosomal protein S1e {ECO:0000256|HAMAP-Rule:MF_00359}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg22_1214_Bin_231_scaffold_12333_17

Not on your lists

7947..8621
DNA (675bp) protein (225aa)
hypothetical protein
hypothetical protein id=5241418 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60409.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg22_1214_Bin_231_scaffold_12333_18

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comp(8608..9516)
DNA (909bp) protein (303aa)
protease IV (EC:3.4.21.-)
signal peptide peptidase SppA, 36K type; K04773 protease IV [EC:3.4.21.-] id=5241419 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Protease IV {ECO:0000313|EMBL:AJF60410.1}; EC=3.4.21.- {ECO:0000313|EMBL:AJF60410.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg22_1214_Bin_231_scaffold_12333_19
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

9562..10068
DNA (507bp) protein (169aa)
hypothetical protein
hypothetical protein id=5241420 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg22_1214_Bin_231_scaffold_12333_20

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10072..10566
DNA (495bp) protein (165aa)
hypothetical protein
transmembrane_regions id=5241421 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60412.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg22_1214_Bin_231_scaffold_12333_21

Not on your lists

comp(10588..12198)
DNA (1611bp) protein (537aa)
hypothetical protein
putative preprotein translocase subunit SecD id=5241422 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60413.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg22_1214_Bin_231_scaffold_12333_22

Not on your lists

comp(12204..13286)
DNA (1083bp) protein (361aa)
preprotein translocase subunit SecF
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF id=5241423 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg22_1214_Bin_231_scaffold_12333_23
Thermococcus sp. 4557, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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13429..14415
DNA (987bp) protein (329aa)
Predicted GTPase n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HNG3_THES4
putative GTPase
Predicted GTPase {ECO:0000313|EMBL:AEK72591.1}; TaxID=1042877 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sp. (strain CGMCC 1.5172 / 4557).;"
Meg22_1214_Bin_231_scaffold_12333_24
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

14497..14775
DNA (279bp) protein (93aa)
hypothetical protein
hypothetical protein; K09721 hypothetical protein id=5241424 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg22_1214_Bin_231_scaffold_12333_25
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

14780..16102
DNA (1323bp) protein (441aa)
DNA polymerase II small subunit (EC:2.7.7.7)
DNA polymerase II small subunit (EC:2.7.7.7); K02323 DNA polymerase II small subunit [EC:2.7.7.7] id=5241425 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg22_1214_Bin_231_scaffold_12333_26

Not on your lists

16233..19643
DNA (3411bp) protein (1137aa)
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
DNA polymerase II, large subunit DP2 (EC:2.7.7.7); K02322 DNA polymerase II large subunit [EC:2.7.7.7] id=5241426 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA polymerase II large subunit (EC:2.7.7.7)
Meg22_1214_Bin_231_scaffold_12333_27
unknown

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comp(19644..20327)
DNA (684bp) protein (228aa)

This feature has no annotations

Meg22_1214_Bin_231_scaffold_12333_28

Not on your lists

comp(20339..20707)
DNA (369bp) protein (123aa)
hypothetical protein
Cell division protein SepF/SepF-related id=5241428 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60419.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg22_1214_Bin_231_scaffold_12333_29
AR10, Diapherotrites, DPANN, Archaea

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20851..22047
DNA (1197bp) protein (399aa)
cdc6; archaeal cell division control protein 6
cdc6; cell division control protein 6; K10725 archaeal cell division control protein 6 id=5241429 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg22_1214_Bin_231_scaffold_12333_30

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comp(22073..23953)
DNA (1881bp) protein (627aa)
Glycoside hydrolase family protein n=1 Tax=Halorubrum aidingense JCM 13560 PF09_9EURY">RepID=M0PF09_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KHO55621.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
hypothetical protein
Displaying items 1-30 of 32 in total

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