ggKbase home page

Meg22_1214_Bin_346_scaffold_10258

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1214_Bin_346_scaffold_10258_1
Methanocaldococcus vulcanius, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists


1..537
DNA (537bp) protein (179aa)
Protein pelota homolog {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS00004956}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS00011872};; TaxID=579137 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7); (Methanococcus vulcanius).;"
Protein pelota homolog n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RDZ0_METVM
translation factor pelota
Meg22_1214_Bin_346_scaffold_10258_2
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(527..1045)
DNA (519bp) protein (173aa)
tRNA-intron endonuclease, archaea type (EC:4.6.1.16)
tRNA intron endonuclease id=4930106 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=RBG_16_Micrarchaeota_49_10_curated
Meg22_1214_Bin_346_scaffold_10258_3
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(1198..1875)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI000376A854
glycosyl transferase
Tax=RBG_13_Bathyarchaeota_46_16b_curated
Meg22_1214_Bin_346_scaffold_10258_4
unknown

Not on your lists

comp(1908..2060)
DNA (153bp) protein (51aa)

This feature has no annotations

Meg22_1214_Bin_346_scaffold_10258_5
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists


2099..2704
DNA (606bp) protein (202aa)
o-sialoglycoprotein endopeptidase (EC:3.4.24.57)
O-sialoglycoprotein endopeptidase n=1 Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B3D796
Tax=RBG_13_Nitrospirae_43_8_curated
Meg22_1214_Bin_346_scaffold_10258_6
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

2673..2906
DNA (234bp) protein (78aa)
Tax=CG_Aenigma_01
Meg22_1214_Bin_346_scaffold_10258_7
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists


2907..3368
DNA (462bp) protein (154aa)
30S ribosomal protein S15 n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VR59_9EURY
rps15p; 30S ribosomal protein S15
Tax=CG_Aenigma_01
Meg22_1214_Bin_346_scaffold_10258_8
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists


3373..3930
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B2FAEE
RPS1A; 30S ribosomal protein S3
Tax=RBG_16_Micrarchaeota_49_10_curated
Meg22_1214_Bin_346_scaffold_10258_9
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3919..5088)
DNA (1170bp) protein (390aa)
Conserved protein id=4379349 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
peptidase m50
Tax=CG_Desulfob_01
Meg22_1214_Bin_346_scaffold_10258_10
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

5148..5903
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0M7I8_ARTPP
hypothetical protein
Tax=CG_Aenigma_01
Meg22_1214_Bin_346_scaffold_10258_trna_2
unknown

Not on your lists

comp(5955..6038)
DNA (84bp)
transferRNA Leu
Meg22_1214_Bin_346_scaffold_10258_11
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(6097..6513)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037F4F77
hypothetical protein
Tax=CG_Pacearch_01
Meg22_1214_Bin_346_scaffold_10258_12

Not on your lists

comp(6534..7322)
DNA (789bp) protein (263aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
DNA-directed RNA polymerase subunit D id=4922286 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
DNA-directed RNA polymerase, subunit D
Meg22_1214_Bin_346_scaffold_10258_13
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists


comp(7368..7811)
DNA (444bp) protein (148aa)
30S ribosomal protein S11 n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LHM3_THEBM
30S Ribosomal protein S11
Tax=RBG_16_Micrarchaeota_49_10_curated
Meg22_1214_Bin_346_scaffold_10258_14
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists


comp(7811..8299)
DNA (489bp) protein (163aa)
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=18248037 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
30S ribosomal protein S4
Tax=CG_Aenigma_01
Meg22_1214_Bin_346_scaffold_10258_15
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists


comp(8296..8769)
DNA (474bp) protein (158aa)
30S ribosomal protein S13 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A4ACD
30S ribosomal protein S13
Tax=CG_Aenigma_01
Meg22_1214_Bin_346_scaffold_10258_trna_1
unknown

Not on your lists

comp(8822..8920)
DNA (99bp)
transferRNA Ala
Meg22_1214_Bin_346_scaffold_10258_16
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(8924..9097)
DNA (174bp) protein (58aa)
50S ribosomal protein L24e n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VTZ2_METIM
ribosomal protein L24E
Tax=RBG_16_Micrarchaeota_49_10_curated
Meg22_1214_Bin_346_scaffold_10258_17
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists


comp(9100..9309)
DNA (210bp) protein (70aa)
ribosomal protein S28E/S33 id=18248032 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
ribosomal protein S28E/S33
Tax=RBG_16_Micrarchaeota_49_10_curated
Meg22_1214_Bin_346_scaffold_10258_18
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists


comp(9314..9658)
DNA (345bp) protein (115aa)
50S ribosomal protein L7Ae n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=RL7A_HYPBU
rpl7ae; 50S ribosomal protein L7Ae
Tax=CG_Aenigma_01
Meg22_1214_Bin_346_scaffold_10258_19
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(9733..11382)
DNA (1650bp) protein (550aa)
Glutamate--tRNA ligase n=2 Tax=Methanotorris RepID=F6BEG2_METIK id=5103739 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Glutamate-tRNA ligase
Tax=CG_Aenigma_01
Meg22_1214_Bin_346_scaffold_10258_20
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(11419..12234)
DNA (816bp) protein (272aa)
MEMO1 family protein Mfer_0894 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZG0_METFV
hypothetical protein
Tax=CG_Aenigma_01
Meg22_1214_Bin_346_scaffold_10258_21
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(12243..12863)
DNA (621bp) protein (207aa)
indolepyruvate ferredoxin oxidoreductase, beta subunit (EC:1.2.7.8)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037B0BD3
Tax=RBG_16_Micrarchaeota_36_9_curated
Meg22_1214_Bin_346_scaffold_10258_22
unknown

Not on your lists

comp(12860..13111)
DNA (252bp) protein (84aa)

This feature has no annotations

Meg22_1214_Bin_346_scaffold_10258_23
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(13108..14967)
DNA (1860bp) protein (620aa)
iorA; indolepyruvate oxidoreductase, subunit alpha (EC:1.2.7.8)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000361FACC
Tax=RBG_16_Micrarchaeota_36_9_curated
Meg22_1214_Bin_346_scaffold_10258_24
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(14975..16282)
DNA (1308bp) protein (436aa)
Ferredoxin-dependent glutamate synthase n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QTP2_VULDI
ferredoxin-dependent glutamate synthase
Tax=RBG_16_Euryarchaeota_67_27_curated
Meg22_1214_Bin_346_scaffold_10258_25
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

16366..17064
DNA (699bp) protein (233aa)
TrkA-N domain protein id=4459017 bin=GWF2_OP3_38_59 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
TrkA-N domain-containing protein
Tax=S_Thermoanaerobacterales_50_218
Meg22_1214_Bin_346_scaffold_10258_26
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(17065..17883)
DNA (819bp) protein (273aa)
Aspartate aminotransferase n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HLZ1_PYRSN
aspartate aminotransferase
Tax=CG_Aenigma_01
Displaying 28 items

View Taxonomy