ggKbase home page

Meg_22_1618_bin_64_scaffold_5478

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg_22_1618_bin_64_scaffold_5478_1
unknown

Not on your lists

182..1039
DNA (858bp) protein (286aa)

This feature has no annotations

Meg_22_1618_bin_64_scaffold_5478_2

Not on your lists

1061..4030
DNA (2970bp) protein (990aa)
chromosome segregation protein
chromosome segregation protein SMC; K03529 chromosome segregation protein id=5240998 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Chromosome segregation protein {ECO:0000313|EMBL:AJF59989.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg_22_1618_bin_64_scaffold_5478_3
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(4037..6502)
DNA (2466bp) protein (822aa)
hypothetical protein
ATP-dependent protease; K06870 uncharacterized protein id=5241002 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg_22_1618_bin_64_scaffold_5478_4
CG_Micra_06, Micraarchaeota, Archaea

Not on your lists

6547..7029
DNA (483bp) protein (161aa)
Protein-disulfide isomerase-like protein n=1 Tax=uncultured bacterium RepID=K2CS89_9BACT
protein-disulfide isomerase-like protein
Tax=CG_Micra_06
Meg_22_1618_bin_64_scaffold_5478_5
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7011..8219
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RTZ0_9BACT
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Meg_22_1618_bin_64_scaffold_5478_6
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8249..8551)
DNA (303bp) protein (101aa)
50S ribosomal protein L12; K02869 large subunit ribosomal protein L12 id=5045961 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L12P, large subunit ribosomal protein L12
Tax=AR4
Meg_22_1618_bin_64_scaffold_5478_7

Not on your lists


comp(8593..9555)
DNA (963bp) protein (321aa)
rplP0; large subunit ribosomal protein L10
rplP0; acidic ribosomal protein P0; K02864 large subunit ribosomal protein L10 id=5241004 bin=GW2011_AR10_complete species=Methanocaldococcus villosus genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg_22_1618_bin_64_scaffold_5478_8
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


comp(9557..10213)
DNA (657bp) protein (219aa)
rpl1P; large subunit ribosomal protein L1
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 id=5241005 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg_22_1618_bin_64_scaffold_5478_9

Not on your lists


comp(10286..10843)
DNA (558bp) protein (186aa)
50S ribosomal protein L17, large subunit ribosomal protein L11
rpl11p; 50S ribosomal protein L17; K02867 large subunit ribosomal protein L11 id=5241006 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg_22_1618_bin_64_scaffold_5478_10

Not on your lists


comp(10866..11303)
DNA (438bp) protein (146aa)
transcriptional antiterminator NusG
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=5241007 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg_22_1618_bin_64_scaffold_5478_11

Not on your lists

comp(11375..11569)
DNA (195bp) protein (65aa)
Protein translocase subunit SecE n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HM73_PYRSN
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
preprotein translocase subunit SecE
Meg_22_1618_bin_64_scaffold_5478_12

Not on your lists

comp(11606..12730)
DNA (1125bp) protein (375aa)
cell division protein FtsZ, cell division protein FtsZ
FtsZ_1; cell division protein FtsZ; K03531 cell division protein FtsZ id=5241009 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg_22_1618_bin_64_scaffold_5478_13
unknown

Not on your lists

13044..13436
DNA (393bp) protein (131aa)

This feature has no annotations

Meg_22_1618_bin_64_scaffold_5478_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

13526..14482
DNA (957bp) protein (319aa)
translation initiation factor IF-2; K03680 translation initiation factor eIF-2B subunit delta id=5097632 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
translation initiation factor IF-2
Tax=CG_Woesearch_02
Meg_22_1618_bin_64_scaffold_5478_15
unknown

Not on your lists

comp(14492..14908)
DNA (417bp) protein (139aa)

This feature has no annotations

Displaying 15 items

View Taxonomy