ggKbase home page

BSR_inoc_17484

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_17484_1
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(3..809)
DNA (807bp) protein (269aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036EB389
BSR_inoc_17484_2
Candidatus Methanomethylophilus alvus, Candidatus Methanomethylophilus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(815..1081)
DNA (267bp) protein (89aa)
DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=1236689 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanomethylophilus.;" source="Candidatus Methanomethylophilus alvus Mx1201.;"
DNA-directed RNA polymerase subunit H n=2 Tax=Euryarchaeota RepID=M9SLR9_9EURY
BSR_inoc_17484_3
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1855..2121
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000376DCCF
translation elongation factor aEF-1 beta
Elongation factor 1-beta {ECO:0000255|HAMAP-Rule:MF_00043}; Short=EF-1-beta {ECO:0000255|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000255|HAMAP-Rule:MF_00043}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta thermophila (strain DSM 6194 / PT) (Methanothrix; thermophila (strain DSM 6194 / PT)).;"
BSR_inoc_17484_4
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

2178..3797
DNA (1620bp) protein (540aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036178CE
putative Fe-S oxidoreductase
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:AGN27238.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_17484_5
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

3827..4876
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036A36A4
DNA primase large subunit
DNA primase large subunit PriL {ECO:0000256|HAMAP-Rule:MF_00701}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_17484_6
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(4863..5498)
DNA (636bp) protein (212aa)
archaetidylinositol phosphate synthase (EC:2.7.8.39)
Candidatus Methanoplasma termitum strain MpT1, complete genome {ECO:0000313|EMBL:AIZ57047.1}; EC=2.7.8.39 {ECO:0000313|EMBL:AIZ57047.1};; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanoplasma.;" source="Candidatus Methanoplasma termitum.;"
Phosphatidylglycerophosphate synthase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TBW0_9EURY
BSR_inoc_17484_7
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(5489..5968)
DNA (480bp) protein (160aa)
Putative adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00039}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00039};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00039};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00039}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037B963D
AMP/CMP kinase AK6
BSR_inoc_17484_8
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(6169..6981)
DNA (813bp) protein (271aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037E6759
BSR_inoc_17484_9
Thermoplasmatales archaeon BRNA1, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

7064..7765
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003810FFF
RNA methyltransferase, TrmH family, group 1
RNA methyltransferase, TrmH family, group 1 {ECO:0000313|EMBL:AGI47062.1}; TaxID=1054217 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon BRNA1.;"
BSR_inoc_17484_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(7767..8792)
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035FD254
cell division protein FtsZ
Tax=RBG_16_Euryarchaeota_67_27_curated
BSR_inoc_17484_11
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(8826..9137)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036C086D
putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain
Putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain {ECO:0000313|EMBL:AGY50231.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
BSR_inoc_17484_12
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

9371..9919
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000371F3A4
transcription factor
Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
BSR_inoc_17484_13
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

9916..10752
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037BF30C
Uncharacterized protein {ECO:0000313|EMBL:AGY50230.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
hypothetical protein
BSR_inoc_17484_14
R_RIF_OP11_03_50_28, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(10749..10976)
DNA (228bp) protein (76aa)
Acylphosphatase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HNH2_ACIS0
acylphosphatase
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_50_28_curated
BSR_inoc_17484_15
RBG_16_Euryarchaeota_62_10_curated, Euryarchaeota, Archaea

Not on your lists

11146..12267
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003778FC2
cell division protein FtsZ
Tax=RBG_16_Euryarchaeota_62_10_curated
BSR_inoc_17484_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

12267..13037
DNA (771bp) protein (257aa)
methyltransferase n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174610D
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:CDM64390.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Methyltransferase type 11
BSR_inoc_17484_17
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13068..13235)
DNA (168bp) protein (56aa)
Transcriptional regulator, XRE family n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CWJ5_METMJ
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABN57745.1}; TaxID=368407 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1).;"
BSR_inoc_17484_18
RBG_13_Euryarchaeota_61_15_curated, Euryarchaeota, Archaea

Not on your lists

13575..14678
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003829ACA
cell division protein FtsZ
Tax=RBG_13_Euryarchaeota_61_15_curated
BSR_inoc_17484_19
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

14732..14959
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000380AC36
secE; preprotein translocase subunit SecE
Tax=RBG_16_Euryarchaeota_68_12_curated
BSR_inoc_17484_20
RBG_13_Euryarchaeota_61_15_curated, Euryarchaeota, Archaea

Not on your lists


14982..15845
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003720D25
Putative transcription antitermination protein NusG
Tax=RBG_13_Euryarchaeota_61_15_curated
BSR_inoc_17484_21
RBG_16_Euryarchaeota_62_10_curated, Euryarchaeota, Archaea

Not on your lists


15850..16326
DNA (477bp) protein (159aa)
50S ribosomal protein L11 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7V9_9EURY
rpl11p; 50S ribosomal protein L11P
Tax=RBG_16_Euryarchaeota_62_10_curated
BSR_inoc_17484_22
Methanolacinia petrolearia, Methanolacinia, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16422..17987
DNA (1566bp) protein (522aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RDF8_METP4
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ADN34842.1}; TaxID=679926 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanolacinia.;" source="Methanolacinia petrolearia (strain DSM 11571 / OCM 486 / SEBR 4847); (Methanoplanus petrolearius).;"
BSR_inoc_17484_23
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


18066..18629
DNA (564bp) protein (188aa)
50S ribosomal protein L1 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003677105
rpl1; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318, ECO:0000256|SAAS:SAAS00010815}; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanoplasma.;" source="Candidatus Methanoplasma termitum.;"
Displaying 23 items

View Taxonomy