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SR2-18-Sp2_coassembly_scaffold_655768

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR2-18-Sp2_coassembly_scaffold_655768_1
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

492..2270
DNA (1779bp) protein (593aa)
Aldehyde ferredoxin oxidoreductase (EC:1.2.7.5)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00036A6179
Tax=GWF2_Bacteroidetes_38_335_curated
SR2-18-Sp2_coassembly_scaffold_655768_2
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(2370..3278)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00035D63FC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ16165.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
SR2-18-Sp2_coassembly_scaffold_655768_3
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

3343..4569
DNA (1227bp) protein (409aa)
homoserine dehydrogenase (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] id=16849705 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
homoserine dehydrogenase
Tax=RBG_16_Aminicenantes_63_16_curated
SR2-18-Sp2_coassembly_scaffold_655768_4
unknown

Not on your lists

comp(4664..5035)
DNA (372bp) protein (124aa)

This feature has no annotations

SR2-18-Sp2_coassembly_scaffold_655768_5
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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comp(5206..5466)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TAZ0_9EURY
hypothetical protein
Tax=RBG_13_Bathyarchaeota_52_12_curated
SR2-18-Sp2_coassembly_scaffold_655768_6
bacterium UASB270, Bacteria

Not on your lists

comp(5517..6764)
DNA (1248bp) protein (416aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK61211.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
aco:Amico_0490 hypothetical protein id=1247133 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
SR2-18-Sp2_coassembly_scaffold_655768_7
GWC2_Planctomycetes_45_44_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

6904..8028
DNA (1125bp) protein (375aa)
aspartate aminotransferase (transaminase a) (aspat) (EC:2.6.1.1)
Aminotransferase, class I and II id=4680833 bin=GWC2_Planctomycetes_45_44 species=Candidatus Puniceispirillum marinum genus=Candidatus Puniceispirillum taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
Tax=GWC2_Planctomycetes_45_44_curated
SR2-18-Sp2_coassembly_scaffold_655768_8
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

8303..8626
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037F5CBE
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
SR2-18-Sp2_coassembly_scaffold_655768_9
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8627..8926)
DNA (300bp) protein (100aa)
Signal recognition particle 19 kDa protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WLM9_METH6
signal recognition particle protein
Signal recognition particle 19 kDa protein {ECO:0000256|HAMAP-Rule:MF_00305}; Short=SRP19 {ECO:0000256|HAMAP-Rule:MF_00305};; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strain 6Ac).;"
SR2-18-Sp2_coassembly_scaffold_655768_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(8937..9320)
DNA (384bp) protein (128aa)
Ribosomal protein S8e n=1 Tax=mine drainage metagenome RepID=T1BJ15_9ZZZZ
30S ribosomal protein S8e
Tax=RBG_16_Euryarchaeota_68_13_curated
SR2-18-Sp2_coassembly_scaffold_655768_11
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists

comp(9359..11314)
DNA (1956bp) protein (652aa)
Putative uncharacterized protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IES8_ACIB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD07951.1}; TaxID=439481 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum boonei (strain DSM 19572 / T469).;"
SR2-18-Sp2_coassembly_scaffold_655768_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(11317..12543)
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003670F63
Glucosamine-1-phosphate N-acetyltransferase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
SR2-18-Sp2_coassembly_scaffold_655768_13
unknown

Not on your lists

comp(12540..12638)
DNA (99bp) protein (33aa)

This feature has no annotations

SR2-18-Sp2_coassembly_scaffold_655768_14
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(12635..13942)
DNA (1308bp) protein (436aa)
Probable phosphoglucosamine mutase n=2 Tax=Methanosarcina mazei RepID=GLMM_METMA
Phosphoglucomutase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR2-18-Sp2_coassembly_scaffold_655768_15
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

Not on your lists

14154..14372
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T465_9EURY
hypothetical protein
Tax=RBG_13_Euryarchaeota_57_23_curated
SR2-18-Sp2_coassembly_scaffold_655768_trna_1
unknown

Not on your lists

14479..14562
DNA (84bp)
transferRNA Leu
SR2-18-Sp2_coassembly_scaffold_655768_16
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(14974..17160)
DNA (2187bp) protein (729aa)
(NiFe) hydrogenase maturation protein HypF n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VNT0_9EURY
(NiFe) hydrogenase maturation protein HypF {ECO:0000313|EMBL:ENO11915.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
hypF; [NiFe] hydrogenase maturation protein HypF
SR2-18-Sp2_coassembly_scaffold_655768_17
RBG_13_Euryarchaeota_61_15_curated, Euryarchaeota, Archaea

Not on your lists

17269..17766
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z4Z2_FLABF
hypothetical protein
Tax=RBG_13_Euryarchaeota_61_15_curated
SR2-18-Sp2_coassembly_scaffold_655768_18
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

17783..18517
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036F1B3B
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
SR2-18-Sp2_coassembly_scaffold_655768_19
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(18608..20104)
DNA (1497bp) protein (499aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7Z7_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN27062.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
Displaying 20 items

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