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SRVP18_trench_6_60cm_scaffold_13320

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SRVP18_trench_6_60cm_scaffold_13320_1
unknown

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comp(1..90)
DNA (90bp) protein (30aa)

This feature has no annotations

SRVP18_trench_6_60cm_scaffold_13320_2
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(150..1163)
DNA (1014bp) protein (338aa)
Putative glycosyltransferase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I6Q2_METCZ
glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:AFC99372.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 /; HZ254).;"
SRVP18_trench_6_60cm_scaffold_13320_3
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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1282..1416
DNA (135bp) protein (45aa)
rfbC; dTDP-4-dehydrorhamnose 3,5 epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5 epimerase {ECO:0000313|EMBL:CAJ35682.1}; EC=5.1.3.13 {ECO:0000313|EMBL:CAJ35682.1};; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50).;"
dTDP-4-dehydrorhamnose 3,5 epimerase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W7G1_UNCMA
SRVP18_trench_6_60cm_scaffold_13320_4
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1640..2596
DNA (957bp) protein (319aa)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:AKB33552.1}; EC=4.2.1.46 {ECO:0000313|EMBL:AKB33552.1};; TaxID=1434119 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae HI350.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FX7_METBF
SRVP18_trench_6_60cm_scaffold_13320_5
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2569..3384
DNA (816bp) protein (272aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:AKB12930.1}; EC=1.1.1.133 {ECO:0000313|EMBL:AKB12930.1};; TaxID=523844 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila TM-1.;"
dTDP-4-dehydrorhamnose reductase n=2 Tax=Methanosarcina mazei RepID=M1P847_METMZ
dTDP-4-dehydrorhamnose reductase
SRVP18_trench_6_60cm_scaffold_13320_6
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3389..4099
DNA (711bp) protein (237aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:AAM31912.1}; EC=2.7.7.24 {ECO:0000313|EMBL:AAM31912.1};; TaxID=192952 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 /; JCM 11833 / OCM 88) (Methanosarcina frisia).;"
Glucose-1-phosphate thymidylyltransferase n=2 Tax=Methanosarcina mazei RepID=Q8PUW2_METMA
SRVP18_trench_6_60cm_scaffold_13320_7
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4317..5045
DNA (729bp) protein (243aa)
ABC-2 type transporter n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BT08_METCG
ABC transporter
ABC-2 type transporter {ECO:0000313|EMBL:AEB68118.1}; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC; 103675 / OCM 69 / GP-6) (Methanothrix concilii).;"
SRVP18_trench_6_60cm_scaffold_13320_8
Geoglobus acetivorans, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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5177..6331
DNA (1155bp) protein (385aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0B8X9_9EURY
UDP-N-acetylglucosamine 2-epimerase
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:AIY90186.1}; TaxID=565033 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus acetivorans.;"
SRVP18_trench_6_60cm_scaffold_13320_9
unknown

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6887..8152
DNA (1266bp) protein (422aa)
ABC-type polysaccharide/polyol phosphate transport system, ATPase component n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I6Q6_METCZ
polysaccharide/polyol phosphate ABC transporter ATPase
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_13320_10
Arthrospira sp. PCC 8005, Arthrospira, Oscillatoriales, Cyanobacteria, Bacteria

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comp(8304..8705)
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Arthrospira sp. PCC 8005 RepID=H1WKD4_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:CCE20016.1}; TaxID=376219 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira sp. PCC 8005.;"
putative methyltransferase
Displaying 10 items

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