ggKbase home page

SRVP18_trench_6_60cm_scaffold_11352

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SRVP18_trench_6_60cm_scaffold_11352_1
unknown

Not on your lists

comp(128..325)
DNA (198bp) protein (66aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_11352_2
unknown

Not on your lists

823..1866
DNA (1044bp) protein (348aa)
UPI0003D1B632 related cluster n=1 Tax=unknown RepID=UPI0003D1B632
4Fe-4S ferredoxin
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_11352_3
unknown

Not on your lists

2073..2210
DNA (138bp) protein (46aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_11352_4
unknown

Not on your lists

2213..2419
DNA (207bp) protein (69aa)
Sulfur transfer protein involved in thiamine biosynthesis n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9X6_METCZ
thiamine biosynthesis sulfur transfer protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_11352_5
unknown

Not on your lists

2588..3475
DNA (888bp) protein (296aa)
Probable cyclic pyranopterin monophosphate synthase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E961_METEZ
molybdenum cofactor biosynthesis protein A
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_11352_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3481..4407)
DNA (927bp) protein (309aa)
Putative ABC transporter n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YVK1_METPS
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:KCZ72156.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative ABC transporter
SRVP18_trench_6_60cm_scaffold_11352_7
unknown

Not on your lists

5004..5291
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XB6_METBU
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_11352_8
unknown

Not on your lists

5308..5694
DNA (387bp) protein (129aa)
UPF0212 protein Mzhil_0762 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKM3_METZD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_11352_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5697..6359
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q467Z0_METBF
Metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein {ECO:0000313|EMBL:KCZ70666.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SRVP18_trench_6_60cm_scaffold_11352_10
unknown

Not on your lists

comp(6717..7973)
DNA (1257bp) protein (419aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=HEM1_METBU
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_11352_11
unknown

Not on your lists

comp(8001..8636)
DNA (636bp) protein (212aa)
Siroheme synthase n=1 Tax=uncultured organism RepID=M1Q1W9_9ZZZZ
siroheme synthase
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_11352_12
unknown

Not on your lists

comp(8633..9136)
DNA (504bp) protein (168aa)
Transcriptional regulator n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WM3_METBU
AsnC family transcriptional regulator
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 12 items

View Taxonomy