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SR-VP_26_10_2019_2_100cm_scaffold_3102

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_3102_1
unknown

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212..2023
DNA (1812bp) protein (604aa)
Neurofilament heavy polypeptide n=1 Tax=Tupaia chinensis RepID=L8YB60_TUPCH
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3102_2
unknown

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comp(2041..3156)
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VQ1_METBU
flagella protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3102_3
unknown

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3331..4086
DNA (756bp) protein (252aa)
putative circadian clock protein KaiC (EC:2.7.11.1)
UPI0003D1C30D related cluster n=1 Tax=unknown RepID=UPI0003D1C30D
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3102_4
unknown

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4199..4525
DNA (327bp) protein (109aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3102_5
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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4744..6192
DNA (1449bp) protein (483aa)
response regulator receiver/GGDEF/EAL domain-containing protein id=14426278 bin=bin1_lowGC species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
multi-sensor signal transduction histidine kinase
Tax=RBG_13_Nitrospirae_43_8_curated
SR-VP_26_10_2019_2_100cm_scaffold_3102_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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6189..6632
DNA (444bp) protein (148aa)
response regulator receiver protein id=14426277 bin=bin1_lowGC species=Methanobacterium formicicum genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
response regulator receiver protein
Tax=CSP1_2_Dadabacteria
SR-VP_26_10_2019_2_100cm_scaffold_3102_7
Methanobacterium sp. Maddingley MBC34, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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6657..8837
DNA (2181bp) protein (727aa)
PAS domain S-box n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TJX8_9EURY
PAS domain S-box {ECO:0000313|EMBL:EKQ51850.1}; TaxID=1220534 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium sp. Maddingley MBC34.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_3102_8
unknown

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8837..9625
DNA (789bp) protein (263aa)
Putative PAS/PAC sensor protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQK1_METZD
putative PAS/PAC sensor protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3102_9
unknown

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9726..10430
DNA (705bp) protein (235aa)
RecA-superfamily ATPase implicated in signal transduction n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7T7_METMS
RecA-superfamily ATPase implicated in signal transduction
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3102_10
unknown

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10645..12819
DNA (2175bp) protein (725aa)
UPI0003D1B41B related cluster n=1 Tax=unknown RepID=UPI0003D1B41B
Cache sensor-containing methyl-accepting chemotaxis sensory transducer
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3102_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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12829..13356
DNA (528bp) protein (176aa)
CheW protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQ76_METZD
Chemotaxis signal transduction protein {ECO:0000313|EMBL:KCZ71145.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
CheW protein
SR-VP_26_10_2019_2_100cm_scaffold_3102_12
unknown

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13427..13705
DNA (279bp) protein (93aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_3102_13
unknown

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13829..15580
DNA (1752bp) protein (584aa)
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MBT1_9EURY
methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3102_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15621..16142
DNA (522bp) protein (174aa)
CheW protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQ76_METZD
Chemotaxis signal transduction protein {ECO:0000313|EMBL:KCZ71145.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
CheW protein
SR-VP_26_10_2019_2_100cm_scaffold_3102_15
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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16256..16462
DNA (207bp) protein (69aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_3102_16
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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16404..16562
DNA (159bp) protein (53aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying 16 items

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