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SR-VP_26_10_2019_2_100cm_scaffold_726

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_726_1
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1..204
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JCA6_9ARCH
Mobile element protein {ECO:0000313|EMBL:AKB37983.1}; TaxID=1434118 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae C2J.;"
transposase
SR-VP_26_10_2019_2_100cm_scaffold_726_2
unknown

Not on your lists

comp(224..634)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PZZ6_METMA
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_726_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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693..1295
DNA (603bp) protein (201aa)
Probable thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
tmk; thymidylate kinase (EC:2.7.4.9)
Probable thymidylate kinase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=KTHY_METBU
SR-VP_26_10_2019_2_100cm_scaffold_726_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1295..1642
DNA (348bp) protein (116aa)
Appr-1-p processing n=1 Tax=Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) RepID=C1DTE3_SULAA
Putative phosphatase, C-terminal domain of histone macro H2A1 like protein {ECO:0000313|EMBL:KCZ73063.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
appr-1-p processing
SR-VP_26_10_2019_2_100cm_scaffold_726_5
unknown

Not on your lists

1901..2563
DNA (663bp) protein (221aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_726_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2860..4149
DNA (1290bp) protein (430aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Tryptophan--tRNA ligase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KY59_METHD
tryptophanyl-tRNA synthetase
SR-VP_26_10_2019_2_100cm_scaffold_726_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4167..5333)
DNA (1167bp) protein (389aa)
RNA ligase, Pab1020 family {ECO:0000313|EMBL:KCZ70741.1}; EC=6.5.1.1 {ECO:0000313|EMBL:KCZ70741.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TH69_METAC
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_726_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5330..6112)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TH71_METAC
CBS-domain-containing membrane protein {ECO:0000313|EMBL:KCZ70742.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_726_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6122..7018)
DNA (897bp) protein (299aa)
CBS domain protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BWT7_METCG
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ70743.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
CBS domain-containing protein
SR-VP_26_10_2019_2_100cm_scaffold_726_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7028..7963)
DNA (936bp) protein (312aa)
Putative signal transduction protein with CBS domains n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5T2_METEZ
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ70744.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative signal transduction protein
SR-VP_26_10_2019_2_100cm_scaffold_726_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7973..8761)
DNA (789bp) protein (263aa)
CBS domain protein n=2 Tax=Methanosarcina mazei RepID=M1QID1_METMZ
Putative signal-transduction protein {ECO:0000313|EMBL:KCZ70745.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
CBS domain protein
SR-VP_26_10_2019_2_100cm_scaffold_726_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8825..9373)
DNA (549bp) protein (183aa)
Putative signal-transduction protein with CBS domains n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B5X6_METTP
signal-transduction protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_726_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9489..9899)
DNA (411bp) protein (137aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYK3_METPS
ribH; 6,7-dimethyl-8-ribityllumazine synthase
SR-VP_26_10_2019_2_100cm_scaffold_726_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10029..11111
DNA (1083bp) protein (361aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=ILVC_METBU
SR-VP_26_10_2019_2_100cm_scaffold_726_15
unknown

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11136..11252
DNA (117bp) protein (39aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_726_16
unknown

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comp(11288..11626)
DNA (339bp) protein (113aa)
Blue (Type 1) copper domain protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E936_METEZ id=5103245 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
blue (type 1) copper domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_726_17
unknown

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11839..12273
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W4A0_UNCMA
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_726_18
unknown

Not on your lists

12273..12671
DNA (399bp) protein (133aa)
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B9N0_METTP
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_726_19
unknown

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12719..14449
DNA (1731bp) protein (577aa)
ppsA-2; phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthetase (PEP synthase) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W499_UNCMA
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_726_20
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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14440..15318
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E829_METEZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI73371.1}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303).;"
SR-VP_26_10_2019_2_100cm_scaffold_726_21

Not on your lists

15384..15674
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JEN8_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH36996.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
nucleotidyltransferase
SR-VP_26_10_2019_2_100cm_scaffold_726_22

Not on your lists

15671..16018
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JEN7_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH36995.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_726_23
unknown

Not on your lists

16015..16326
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UI2_METBU
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_726_24
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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16403..17671
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W5D8_UNCMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ36405.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50).;"
SR-VP_26_10_2019_2_100cm_scaffold_726_25
unknown

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comp(17697..18896)
DNA (1200bp) protein (400aa)
Archaeal S-adenosylmethionine synthetase (EC:2.5.1.6)
Methionine adenosyltransferase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TS43_METAC
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_726_26
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(19075..19593)
DNA (519bp) protein (173aa)
Gamma-carbonic anhydrase family protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12X27_METBU
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_726_27
GWD2_OD1_38_7, Moranbacteria, Parcubacteria, Bacteria

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comp(19763..20254)
DNA (492bp) protein (164aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ79459.1}; TaxID=1618706 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWD2_38_7.;"
SR-VP_26_10_2019_2_100cm_scaffold_726_28
unknown

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comp(20323..20544)
DNA (222bp) protein (74aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_726_29
unknown

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comp(20605..20805)
DNA (201bp) protein (67aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_726_30
unknown

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20933..23491
DNA (2559bp) protein (853aa)
Valine--tRNA ligase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKB5_METZD
valyl-tRNA synthetase
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying items 1-30 of 63 in total

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