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SR-VP_26_10_2019_2_100cm_scaffold_826

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_826_1
unknown

Not on your lists

comp(1..735)
DNA (735bp) protein (245aa)
HI0933 family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMX6_9BACT
HI0933 family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_826_2
unknown

Not on your lists


comp(898..2220)
DNA (1323bp) protein (441aa)
Signal recognition particle 54 kDa protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=SRP54_METBF
signal recognition particle subunit FFH/SRP54 (srp54)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_826_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2342..2545
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71986.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_826_4
unknown

Not on your lists

comp(2548..2748)
DNA (201bp) protein (67aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_826_5
unknown

Not on your lists

2829..3392
DNA (564bp) protein (188aa)
UbiX family decarboxylase associated with menaquinone via futalosine n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1PY81_METMZ
UbiX family decarboxylase associated with menaquinone via futalosine
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_826_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3389..4663
DNA (1275bp) protein (425aa)
UbiD family decarboxylase {ECO:0000313|EMBL:KCZ71988.1}; EC=4.1.1.61 {ECO:0000313|EMBL:KCZ71988.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
4-hydroxybenzoate decarboxylase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46EJ8_METBF
3-octaprenyl-4-hydroxybenzoate decarboxylase
SR-VP_26_10_2019_2_100cm_scaffold_826_7
unknown

Not on your lists

4650..5903
DNA (1254bp) protein (418aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_826_8
unknown

Not on your lists

5906..6208
DNA (303bp) protein (101aa)
Putative nucleotidyltransferase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KML5_9FIRM
putative nucleotidyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_826_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6528..7685
DNA (1158bp) protein (386aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PWQ1_METMA
Uncharacterized protein {ECO:0000313|EMBL:KCZ71991.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_826_10

Not on your lists

comp(7697..10951)
DNA (3255bp) protein (1085aa)
Hypothetical secreted protein, calcineurin-like phosphoesterase family n=1 Tax=uncultured archaeon RepID=D1J9T0_9ARCH
Hypothetical secreted protein, calcineurin-like phosphoesterase family {ECO:0000313|EMBL:CBH38860.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_826_11
unknown

Not on your lists

11178..11543
DNA (366bp) protein (122aa)
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=uncultured archaeon RepID=Q2Y4F9_9ARCH
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_826_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11913..12917)
DNA (1005bp) protein (335aa)
TrkA-N domain protein
k+ transporter, NAD-binding protein; K06881 phosphoesterase RecJ domain-containing protein id=24618982 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_826_13
unknown

Not on your lists

comp(13061..13243)
DNA (183bp) protein (61aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_826_14
unknown

Not on your lists

comp(13249..13536)
DNA (288bp) protein (96aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_826_15
unknown

Not on your lists

14009..15226
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1PAP0_METMZ
Kef-type K+ transport systems (NAD-binding component fused to domain related to exopolyphosphatase)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_826_16
unknown

Not on your lists


15324..18071
DNA (2748bp) protein (916aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
UPI0003D1AA03 related cluster n=1 Tax=unknown RepID=UPI0003D1AA03
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_826_17
unknown

Not on your lists

comp(18113..18661)
DNA (549bp) protein (183aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_826_18
unknown

Not on your lists

18834..22724
DNA (3891bp) protein (1297aa)
Putative ski2-type helicase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MG97_9EURY
DEAD/DEAH box helicase domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_826_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22754..23710
DNA (957bp) protein (319aa)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_01139}; Undecaprenyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01139}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MAR7_9EURY
undecaprenyl diphosphate synthase
SR-VP_26_10_2019_2_100cm_scaffold_826_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23713..24366)
DNA (654bp) protein (218aa)
Undecaprenyl pyrophosphate synthase {ECO:0000313|EMBL:KCZ70562.1}; EC=2.5.1.31 {ECO:0000313|EMBL:KCZ70562.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1A67A related cluster n=1 Tax=unknown RepID=UPI0003D1A67A
undecaprenyl pyrophosphate synthetase
SR-VP_26_10_2019_2_100cm_scaffold_826_21
unknown

Not on your lists

24424..25779
DNA (1356bp) protein (452aa)
TIGR00297 family protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYM7_METHD
TIGR00297 family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_826_trna_1
unknown

Not on your lists

25770..25843
DNA (74bp)
transferRNA Arg
SR-VP_26_10_2019_2_100cm_scaffold_826_22
unknown

Not on your lists

comp(26187..26486)
DNA (300bp) protein (100aa)
Nucleoid protein MC1 n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MDV3_9EURY
nucleoid protein MC1
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_826_23
unknown

Not on your lists

comp(26575..26709)
DNA (135bp) protein (45aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_826_24
unknown

Not on your lists

26845..28212
DNA (1368bp) protein (456aa)
L-threonine 3-O-phosphate decarboxylase (EC:4.1.1.81)
L-threonine O-3-phosphate decarboxylase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q465W6_METBF
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_826_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

28340..29263
DNA (924bp) protein (308aa)
Probable cobalamin biosynthesis protein CobD n=2 Tax=Methanosarcina mazei RepID=M1QKH6_METMZ
Probable cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Adenosylcobinamide-phosphate synthase
SR-VP_26_10_2019_2_100cm_scaffold_826_26
unknown

Not on your lists

29283..29885
DNA (603bp) protein (201aa)
Alpha-ribazole phosphatase CobZ n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E9J3_METMS
alpha-ribazole phosphatase CobZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_826_27
unknown

Not on your lists

29882..30040
DNA (159bp) protein (53aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_826_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

30037..30804
DNA (768bp) protein (256aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Cobalamin synthase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6A8_METEZ
cobalamin 5'-phosphate synthase
SR-VP_26_10_2019_2_100cm_scaffold_826_29
unknown

Not on your lists

30804..31400
DNA (597bp) protein (199aa)
adenosylcobinamide-phosphate guanylyltransferase (EC:2.7.7.62)
Adenosylcobinamide-phosphate guanylyltransferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q465W2_METBF
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying items 1-30 of 34 in total

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