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SR-VP_26_10_2019_2_100cm_scaffold_2211

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_2211_1
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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1..201
DNA (201bp) protein (67aa)
Putative nucleotidyltransferase n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BL53_9EURY
putative nucleotidyltransferase
Putative nucleotidyltransferase {ECO:0000313|EMBL:AGK61271.1}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sulfaticallidus PM70-1.;"
SR-VP_26_10_2019_2_100cm_scaffold_2211_2
unknown

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comp(276..1238)
DNA (963bp) protein (321aa)
farnesyltranstransferase (EC:2.5.1.29)
Farnesyltranstransferase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XLQ9_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2211_3
unknown

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comp(1281..2618)
DNA (1338bp) protein (446aa)
Metallo-beta-lactamase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TT34_METAC
Putative Zn-dependent hydrolase in polyisoprenoid biosynthetic cluster
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2211_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2658..3764)
DNA (1107bp) protein (369aa)
Isopentenyl-diphosphate delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00354};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00354};; Isopentenyl diphosphate:dimethylallyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Type 2 isopentenyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC:5.3.3.2)
Isopentenyl-diphosphate delta-isomerase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=IDI2_METBF
SR-VP_26_10_2019_2_100cm_scaffold_2211_5
unknown

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comp(3799..4566)
DNA (768bp) protein (256aa)
Isopentenyl phosphate kinase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MA08_9EURY
aspartate/glutamate/uridylate kinase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2211_6
unknown

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comp(4563..5462)
DNA (900bp) protein (300aa)
Mevalonate kinase n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1P9L6_METMZ
Mevalonate kinase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2211_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5581..6225)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W701_UNCMA
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:KCZ73191.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2211_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6335..6925
DNA (591bp) protein (197aa)
Superoxide dismutase {ECO:0000313|EMBL:KCZ73193.1}; EC=1.15.1.1 {ECO:0000313|EMBL:KCZ73193.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJB4_9BACT
SR-VP_26_10_2019_2_100cm_scaffold_2211_9
unknown

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comp(7144..7266)
DNA (123bp) protein (41aa)
hypothetical protein id=1241719 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2211_10
unknown

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7361..7966
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E7R3_GEOLS
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2211_11
unknown

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7991..8362
DNA (372bp) protein (124aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2211_12
unknown

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comp(8359..11868)
DNA (3510bp) protein (1170aa)
Chromosome partition protein Smc n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAF5_METEZ
chromosome segregation protein SMC
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2211_13
unknown

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comp(11871..12533)
DNA (663bp) protein (221aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2211_14
unknown

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comp(12628..13926)
DNA (1299bp) protein (433aa)
Aspartate--tRNA ligase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KX34_METHD
aspartyl-tRNA synthetase, archaeal type
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2211_15
unknown

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14069..14257
DNA (189bp) protein (63aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2211_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(14332..15900)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYG7_METPS
Putative ATPase {ECO:0000313|EMBL:KCZ71921.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2211_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(15897..16412)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYG8_METPS
Uncharacterized protein {ECO:0000313|EMBL:KCZ71922.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2211_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(16417..17586)
DNA (1170bp) protein (390aa)
NurA domain protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9S5_METCZ
NurA domain-containing protein {ECO:0000313|EMBL:KCZ71923.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
NurA domain-containing protein
SR-VP_26_10_2019_2_100cm_scaffold_2211_19
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(17583..19892)
DNA (2310bp) protein (770aa)
Putative DNA double-strand break repair Rad50 ATPase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYH2_METPS
putative DNA double-strand break repair Rad50 ATPase
Putative DNA double-strand break repair Rad50 ATPase {ECO:0000313|EMBL:BAI61494.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
SR-VP_26_10_2019_2_100cm_scaffold_2211_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(19893..20939)
DNA (1047bp) protein (349aa)
Putative DNA repair exonuclease n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9S3_METCZ
DNA repair exonuclease {ECO:0000313|EMBL:KCZ71925.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
DNA repair exonuclease
Displaying 20 items

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