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SR-VP_26_10_2019_2_100cm_scaffold_2549

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_2549_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1..846
DNA (846bp) protein (282aa)
Zinc metalloprotease n=2 Tax=Methanosarcina mazei RepID=Q8Q0K9_METMA
Putative Zn-dependent protease-like protein {ECO:0000313|EMBL:KCZ71048.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
TldD protein, part of TldE/TldD proteolytic complex
SR-VP_26_10_2019_2_100cm_scaffold_2549_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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906..1178
DNA (273bp) protein (91aa)
Looped-hinge helix DNA binding domain, AbrB family n=2 Tax=Archaea RepID=U1Q8E7_9EURY
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:KCZ70693.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
transcriptional regulator, AbrB family
SR-VP_26_10_2019_2_100cm_scaffold_2549_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1181..1585
DNA (405bp) protein (135aa)
Putative toxin-antitoxin system toxin component, PIN family {ECO:0000313|EMBL:KCZ70692.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative uncharacterized protein id=4924042 bin=PER_GWC2_41_7 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
toxin-antitoxin system toxin component, PIN family
SR-VP_26_10_2019_2_100cm_scaffold_2549_4
Cyanothece sp. ATCC 51142, Cyanothece, Chroococcales, Cyanobacteria, Bacteria

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comp(1713..2030)
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Cyanothece RepID=B1WQG8_CYAA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB51679.1}; TaxID=43989 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain ATCC 51142).;"
SR-VP_26_10_2019_2_100cm_scaffold_2549_5
CG_Elusi_02, Elusimicrobia, Bacteria

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comp(2093..2443)
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos28G7 RepID=Q64AX0_9ARCH
hypothetical protein
Tax=CG_Elusi_02
SR-VP_26_10_2019_2_100cm_scaffold_2549_6

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comp(2433..2684)
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PUJ5_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
SR-VP_26_10_2019_2_100cm_scaffold_2549_7
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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2879..3082
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FRQ6_METHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD42901.1}; TaxID=323259 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
SR-VP_26_10_2019_2_100cm_scaffold_2549_8
unknown

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comp(3079..3333)
DNA (255bp) protein (85aa)
relE; mRNA interferase RelE
SR-VP_26_10_2019_2_100cm_scaffold_2549_9
unknown

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comp(3406..4122)
DNA (717bp) protein (239aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2549_10
unknown

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4418..4654
DNA (237bp) protein (79aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2549_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4675..5028
DNA (354bp) protein (118aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72071.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2549_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5044..5433)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EB45_METEZ
Uncharacterized protein {ECO:0000313|EMBL:KCZ72070.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2549_13
unknown

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comp(5438..6223)
DNA (786bp) protein (262aa)
TIGR00161 family protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KX23_METHD
TIGR00161 family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2549_14
unknown

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6267..7727
DNA (1461bp) protein (487aa)
Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KT75_METHD
archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2549_15
unknown

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7733..8536
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BQ1_METBF
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2549_16
unknown

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comp(8517..9263)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E885_METEZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2549_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9349..9765
DNA (417bp) protein (139aa)
Cytochrome c-type biogenesis protein CcmE {ECO:0000313|EMBL:KCZ72342.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2549_18
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9986..11275
DNA (1290bp) protein (430aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WM06_METH6
Amino acid/polyamine/organocation transporter, APC superfamily
Amino acid/polyamine/organocation transporter, APC superfamily {ECO:0000313|EMBL:AET64381.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strain 6Ac).;"
SR-VP_26_10_2019_2_100cm_scaffold_2549_19
unknown

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11744..14353
DNA (2610bp) protein (870aa)
DNA mismatch repair protein MutS n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MQK8_9EURY
DNA mismatch repair protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2549_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14384..14806)
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos26G2 RepID=Q64BQ6_9ARCH
Putative nucleic acid-binding protein, contains PIN domain {ECO:0000313|EMBL:KCZ73090.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2549_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14784..15023)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos26G2 RepID=Q64BP8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KCZ73091.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2549_22
unknown

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15172..17049
DNA (1878bp) protein (626aa)
Phosphoadenosine phosphosulfate reductase fused to RNA-binding PUA and 4Fe-4S binding domains n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UR6_METBU
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2549_23
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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17428..17664
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos27A8 RepID=Q64BL8_9ARCH
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2549_24
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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17661..17927
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos27A8 RepID=Q64BL9_9ARCH
plasmid stabilization system
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2549_25
CG_Nitrosp_01, Nitrospirae, Bacteria

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18089..19084
DNA (996bp) protein (332aa)
Putative TIM-barrel fold metal-dependent hydrolase id=4127922 bin=GWF2_Nitrospirae_44_13 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=CG_Nitrosp_01
Displaying 25 items

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