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SR-VP_26_10_2019_2_100cm_scaffold_2707

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_2707_1
unknown

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comp(3..698)
DNA (696bp) protein (232aa)
UPI0003D1AFA6 related cluster n=1 Tax=unknown RepID=UPI0003D1AFA6
replication factor C large subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2707_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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756..1844
DNA (1089bp) protein (363aa)
Arabinose efflux permease family protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYZ0_METHD
Arabinose efflux permease family protein {ECO:0000313|EMBL:KCZ71487.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
arabinose efflux permease family protein
SR-VP_26_10_2019_2_100cm_scaffold_2707_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1798..2373)
DNA (576bp) protein (192aa)
GMP synthase [glutamine-hydrolyzing] subunit A {ECO:0000256|HAMAP-Rule:MF_01510}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_01510};; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_01510}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
GMP synthase [glutamine-hydrolyzing] subunit A n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KSY9_METHD
GMP synthase, glutamine-hydrolyzing, N-terminal domain or A subunit
SR-VP_26_10_2019_2_100cm_scaffold_2707_4

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comp(2381..2806)
DNA (426bp) protein (142aa)
Putative uncharacterized protein id=3110653 bin=GWF2_Geobacter_54_21 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
SR-VP_26_10_2019_2_100cm_scaffold_2707_5
CG_Elusi_05, Elusimicrobia, Bacteria

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comp(2799..3068)
DNA (270bp) protein (90aa)
Uncharacterized protein id=3110651 bin=GWF2_Geobacter_54_21 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=CG_Elusi_05
SR-VP_26_10_2019_2_100cm_scaffold_2707_6
unknown

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comp(3071..3169)
DNA (99bp) protein (33aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2707_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3291..3476)
DNA (186bp) protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71485.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2707_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3480..5048)
DNA (1569bp) protein (523aa)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:KCZ72990.1}; EC=1.1.1.95 {ECO:0000313|EMBL:KCZ72990.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XLP8_METZD
SR-VP_26_10_2019_2_100cm_scaffold_2707_9
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5354..8350
DNA (2997bp) protein (999aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2ABZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ21944.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2707_10
unknown

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8351..8998
DNA (648bp) protein (216aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2707_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8995..9714
DNA (720bp) protein (240aa)
2, 5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase {ECO:0000313|EMBL:KCZ72384.1}; EC=1.1.1.302 {ECO:0000313|EMBL:KCZ72384.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.-)
2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12TM0_METBU
SR-VP_26_10_2019_2_100cm_scaffold_2707_12
unknown

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9659..10099
DNA (441bp) protein (147aa)
Transcriptional repressor, CopY family n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MI73_9EURY
transcriptional repressor, CopY family
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2707_13
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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10096..10776
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MFS4_9EURY
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2707_14
unknown

Not on your lists

10816..11784
DNA (969bp) protein (323aa)
Protease HtpX homolog id=4011975 bin=GWF2_OP3_43_52 species=unknown genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
htpX; heat shock protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2707_15
unknown

Not on your lists

12245..13147
DNA (903bp) protein (301aa)
Putative phosphoserine phosphatase n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B7W9_METTP
putative phosphoserine phosphatase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2707_16
unknown

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13182..13457
DNA (276bp) protein (92aa)
Acylphosphatase n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C3A4_THEGP
acylphosphatase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2707_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14050..14340
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TQE3_METAC
Uncharacterized protein {ECO:0000313|EMBL:KCZ71862.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2707_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14337..14711
DNA (375bp) protein (125aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8Q067_METMA
Uncharacterized protein {ECO:0000313|EMBL:KCZ71863.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2707_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14838..16703
DNA (1866bp) protein (622aa)
Metal-dependent phosphohydrolase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MEP9_9EURY
HD superfamily phosphohydrolase {ECO:0000313|EMBL:KCZ72365.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
metal-dependent phosphohydrolase
SR-VP_26_10_2019_2_100cm_scaffold_2707_20
unknown

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16776..16880
DNA (105bp) protein (35aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2707_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16892..17134)
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72363.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2707_22
unknown

Not on your lists

17241..17606
DNA (366bp) protein (122aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2707_23
unknown

Not on your lists

comp(17631..18311)
DNA (681bp) protein (227aa)
lysK; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B789_METTP
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 23 items

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