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SR-VP_26_10_2019_2_100cm_scaffold_2770

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_2770_1
unknown

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1..735
DNA (735bp) protein (245aa)
HTH DNA-binding domain protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UR4_METBU
XRE family transcriptional regulator
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2770_2
unknown

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770..1810
DNA (1041bp) protein (347aa)
UPF0219 protein Metho_2375 n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L0P9_METHD
hydroxymethylglutaryl-CoA synthase, putative
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2770_3
unknown

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1820..2989
DNA (1170bp) protein (390aa)
Beta-ketoacyl synthase/thiolase n=2 Tax=Methanosarcina mazei RepID=M1Q7Z2_METMZ
Beta-ketoacyl synthase/thiolase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2770_4
unknown

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2989..3384
DNA (396bp) protein (132aa)
UPI0003D1B9C8 related cluster n=1 Tax=unknown RepID=UPI0003D1B9C8
conserved protein associated with acetyl-CoA C-acyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2770_5
unknown

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3417..4502
DNA (1086bp) protein (362aa)
Peptidase M50 n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBP0_METEZ
peptidase M50
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2770_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4507..5634)
DNA (1128bp) protein (376aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70731.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2770_7
unknown

Not on your lists

comp(5795..7447)
DNA (1653bp) protein (551aa)
Thermosome, chaperonin Cpn60/TCP-1 n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MRK6_9EURY
thermosome, chaperonin Cpn60/TCP-1
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2770_trna_1
unknown

Not on your lists

7651..7722
DNA (72bp)
transferRNA Cys
SR-VP_26_10_2019_2_100cm_scaffold_2770_trna_2
unknown

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8061..8133
DNA (73bp)
transferRNA Asn
SR-VP_26_10_2019_2_100cm_scaffold_2770_trna_3
unknown

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8162..8236
DNA (75bp)
transferRNA Met
SR-VP_26_10_2019_2_100cm_scaffold_2770_8
unknown

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comp(8397..9407)
DNA (1011bp) protein (337aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PWC6_METMA
Uncharacterized protein {ECO:0000313|EMBL:CEG11921.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2770_9
unknown

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comp(9427..9588)
DNA (162bp) protein (54aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2770_10
unknown

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comp(9635..10120)
DNA (486bp) protein (162aa)
Putative nucleic acid-binding protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I6S4_METCZ
Putative nucleic acid-binding protein {ECO:0000313|EMBL:CEG11922.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
nucleic acid-binding protein
SR-VP_26_10_2019_2_100cm_scaffold_2770_11
unknown

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comp(10131..10718)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RZ87_FERPA
Uncharacterized protein {ECO:0000313|EMBL:CEG11923.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2770_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11069..12286)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q464V9_METBF
Uncharacterized protein {ECO:0000313|EMBL:KCZ71159.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Transcriptional regulator
SR-VP_26_10_2019_2_100cm_scaffold_2770_trna_4
unknown

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12371..12442
DNA (72bp)
transferRNA Gly
SR-VP_26_10_2019_2_100cm_scaffold_2770_13
unknown

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12587..13432
DNA (846bp) protein (282aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2770_14
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13955..15367
DNA (1413bp) protein (471aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CXE1_METMJ
Uncharacterized protein {ECO:0000313|EMBL:AKB28042.1}; TaxID=1434120 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae T4/M.;"
filamentation induced by cAMP protein Fic
SR-VP_26_10_2019_2_100cm_scaffold_2770_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15556..16767)
DNA (1212bp) protein (404aa)
Putative conserved protein containing a ferredoxin-like domain n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BNE0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KCZ71484.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative conserved protein containing a ferredoxin-like domain
SR-VP_26_10_2019_2_100cm_scaffold_2770_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17082..17846
DNA (765bp) protein (255aa)
Methyltransferase type 11 n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M081_GEODF
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:KCZ72608.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
methyltransferase type 11
SR-VP_26_10_2019_2_100cm_scaffold_2770_17
unknown

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comp(17882..17977)
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 21 items

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