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SR-VP_26_10_2019_2_100cm_scaffold_2985

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_2985_1
CG_Pacearch_04, Pacearchaeota, Archaea

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1..219
DNA (219bp) protein (73aa)
Tax=CG_Pacearch_04
SR-VP_26_10_2019_2_100cm_scaffold_2985_2
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(418..684)
DNA (267bp) protein (89aa)
FtrB n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E796_METMS
FtrB
FtrB {ECO:0000313|EMBL:ADE37034.1}; TaxID=547558 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalophilus.;" source="Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP).;"
SR-VP_26_10_2019_2_100cm_scaffold_2985_3
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

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comp(677..1117)
DNA (441bp) protein (147aa)
Putative flavodoxin n=1 Tax=uncultured archaeon RepID=D1JAS6_9ARCH
flavoprotein
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
SR-VP_26_10_2019_2_100cm_scaffold_2985_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(1144..2478)
DNA (1335bp) protein (445aa)
Thioredoxin reductase id=2480748 bin=GWC2_Proteo_65_14_Ab886 species=Marvinbryantia formatexigens genus=Marvinbryantia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
FeS cluster assembly scaffold protein NifU
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2985_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(2483..3649)
DNA (1167bp) protein (389aa)
Probable cysteine desulfurase 1 n=2 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=ISCS1_ARCFU
nifS-1; class-V aminotransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2985_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3923..4384)
DNA (462bp) protein (154aa)
Putative peroxiredoxin {ECO:0000313|EMBL:KCZ72796.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein; K07092 id=1242370 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
putative peroxiredoxin
SR-VP_26_10_2019_2_100cm_scaffold_2985_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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4532..7801
DNA (3270bp) protein (1090aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1PZU6_METMZ
Cell surface protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2985_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(7841..9103)
DNA (1263bp) protein (421aa)
Pneumococcal surface protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TP95_METAC
pspA; surface protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2985_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(9130..10449)
DNA (1320bp) protein (440aa)
pyridoxal-phosphate dependent TrpB-like protein (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNF8_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2985_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(10567..10788)
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UY3_METBU
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2985_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(10791..11840)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MEM8_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2985_12

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comp(11916..12824)
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAJ1_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39121.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
IS481 family transposase
SR-VP_26_10_2019_2_100cm_scaffold_2985_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12904..14637)
DNA (1734bp) protein (578aa)
DNA mismatch repair protein MutL n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VD0_METBU
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
DNA mismatch repair protein MutL
SR-VP_26_10_2019_2_100cm_scaffold_2985_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14801..15199)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MSN1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KCZ72107.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2985_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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15355..16305
DNA (951bp) protein (317aa)
GTP cyclohydrolase MptA n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E9X3_METEZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2985_16
unknown

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comp(16550..16687)
DNA (138bp) protein (46aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2985_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16789..16977
DNA (189bp) protein (63aa)
2-hydroxyglutaryl-CoA dehydratase D-component n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1L0W2_9EURY
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB {ECO:0000313|EMBL:KCZ72629.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
2-hydroxyglutaryl-CoA dehydratase D-component
Displaying 17 items

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