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SR-VP_26_10_2019_C_40cm_scaffold_2124

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_40cm_scaffold_2124_1
unknown

Not on your lists

comp(2..166)
DNA (165bp) protein (55aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_2124_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

518..2428
DNA (1911bp) protein (637aa)
Molybdopterin molybdochelatase {ECO:0000313|EMBL:KCZ70682.1}; EC=2.10.1.1 {ECO:0000313|EMBL:KCZ70682.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Molybdenum cofactor biosynthesis protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TI07_METAC
moeA; putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein
SR-VP_26_10_2019_C_40cm_scaffold_2124_3
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2496..3320
DNA (825bp) protein (275aa)
Uncharacterized protein {ECO:0000313|EMBL:AKB24716.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. MTP4.;"
id=5085146 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
SR-VP_26_10_2019_C_40cm_scaffold_2124_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3360..3929)
DNA (570bp) protein (190aa)
tRNA N6-adenosine threonylcarbamoyltransferase suspected. See adjacent gene [SR-VP_26_10_2019_C_40cm_scaffold_2124_5].
Kae1-associated kinase Bud32 {ECO:0000313|EMBL:KCZ72249.1}; EC=2.7.1.- {ECO:0000313|EMBL:KCZ72249.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
glycoprotease family metalloendopeptidase (EC:3.4.24.57)
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPT4_METZD
SR-VP_26_10_2019_C_40cm_scaffold_2124_5
unknown

Not on your lists


comp(3926..4897)
DNA (972bp) protein (324aa)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXY8_METHD
metallohydrolase, glycoprotease/Kae1 family
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_2124_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5120..5356
DNA (237bp) protein (79aa)
Translation initiation factor 1A n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B5J4_METTP
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
translation initiation factor eIF-1A
SR-VP_26_10_2019_C_40cm_scaffold_2124_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5365..6156
DNA (792bp) protein (264aa)
Serine/threonine protein kinase involved in cell cycle control {ECO:0000313|EMBL:KCZ71997.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KCZ71997.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Serine/threonine protein kinase involved in cell cycle control n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWR1_METHD
serine/threonine protein kinase involved in cell cycle control
SR-VP_26_10_2019_C_40cm_scaffold_2124_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


6153..6689
DNA (537bp) protein (179aa)
KH domain protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNL0_METZD
KH domain protein {ECO:0000313|EMBL:KCZ71996.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative RNA-processing protein
SR-VP_26_10_2019_C_40cm_scaffold_2124_9
Methanosarcina sp. Kolksee, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6728..7243
DNA (516bp) protein (172aa)
Formaldehyde-activating enzyme n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=FAE_METBF
Formaldehyde activating enzyme
Formaldehyde activating enzyme {ECO:0000313|EMBL:AKB48430.1}; TaxID=1434099 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. Kolksee.;"
SR-VP_26_10_2019_C_40cm_scaffold_2124_10
unknown

Not on your lists

7454..7693
DNA (240bp) protein (80aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_2124_11
unknown

Not on your lists

8264..8515
DNA (252bp) protein (84aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_2124_12
unknown

Not on your lists

8527..8718
DNA (192bp) protein (64aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_2124_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8749..9846
DNA (1098bp) protein (366aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71839.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_C_40cm_scaffold_2124_14
unknown

Not on your lists

9889..10113
DNA (225bp) protein (75aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_2124_15
unknown

Not on your lists

10120..11217
DNA (1098bp) protein (366aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_2124_16
unknown

Not on your lists

11214..11786
DNA (573bp) protein (191aa)
Poly(R)-hydroxyalkanoic acid synthase subunit n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MTN9_9FIRM
phaE; putative poly(3-hydroxyalkanoate) synthase component
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_2124_17
unknown

Not on your lists

11808..12998
DNA (1191bp) protein (397aa)
Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CCB6_DESTA
poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_2124_18
unknown

Not on your lists

12995..13732
DNA (738bp) protein (246aa)
3-oxoacyl-[acyl-carrier protein] reductase n=2 Tax=Thermobrachium celere DSM 8682 RepID=R7RTU1_9CLOT
3-oxoacyl-(acyl-carrier-protein) reductase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_2124_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13807..14985
DNA (1179bp) protein (393aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KCZ71843.1}; EC=2.3.1.9 {ECO:0000313|EMBL:KCZ71843.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Acetyl-CoA acetyltransferase n=1 Tax=Clostridium ultunense Esp RepID=M1YW01_9CLOT
acetyl-CoA acetyltransferase
SR-VP_26_10_2019_C_40cm_scaffold_2124_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14991..15842
DNA (852bp) protein (284aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71844.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
3-oxoacyl-(acyl-carrier-protein) reductase id=14431054 bin=bin3_NC10 species=Archaeoglobus sulfaticallidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=bin3_NC10 organism_group=NC10
3-oxoacyl-(acyl-carrier-protein) reductase
SR-VP_26_10_2019_C_40cm_scaffold_2124_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15964..17217
DNA (1254bp) protein (418aa)
Putative esterase of the alpha-beta hydrolase superfamily n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9TAJ8_9CYAN
Putative esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:KCZ71798.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
alpha/beta hydrolase fold protein
SR-VP_26_10_2019_C_40cm_scaffold_2124_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17675..18178)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KW26_METHD
Uncharacterized protein {ECO:0000313|EMBL:KCZ70690.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_2124_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18184..18600)
DNA (417bp) protein (139aa)
UPI0003D1A54D related cluster n=1 Tax=unknown RepID=UPI0003D1A54D
Uncharacterized protein {ECO:0000313|EMBL:KCZ70689.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_2124_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18919..19182
DNA (264bp) protein (88aa)
Putative transcriptional regulator, CopG/Arc/MetJ family n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I862_METB6
Putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain {ECO:0000313|EMBL:KCZ71749.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
CopG/Arc/MetJ family transcriptional regulator
SR-VP_26_10_2019_C_40cm_scaffold_2124_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19201..20340
DNA (1140bp) protein (380aa)
Cell division protein FtsZ n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I812_METCZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ftsZ-1; cell division protein FtsZ
SR-VP_26_10_2019_C_40cm_scaffold_2124_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20556..21335
DNA (780bp) protein (260aa)
AIR carboxylase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TTK3_METAC
NCAIR mutase-like protein {ECO:0000313|EMBL:KCZ71746.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
AIR carboxylase
SR-VP_26_10_2019_C_40cm_scaffold_2124_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21541..21951
DNA (411bp) protein (137aa)
UPI0003D1B233 related cluster n=1 Tax=unknown RepID=UPI0003D1B233
Uncharacterized protein {ECO:0000313|EMBL:KCZ70458.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Protein of unknown function DUF1699
SR-VP_26_10_2019_C_40cm_scaffold_2124_28
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22028..22324)
DNA (297bp) protein (99aa)
Sec-independent protein translocase protein TatA n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28223_ARCFU
Twin-arginine translocation protein TatA
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_2124_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22326..22664)
DNA (339bp) protein (113aa)
Sec-independent protein translocase protein TatA n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PTX5_METMA
Sec-independent protein translocase TatA {ECO:0000313|EMBL:KCZ70456.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
tatA; Sec-independent protein translocase
SR-VP_26_10_2019_C_40cm_scaffold_2124_30
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22684..22956)
DNA (273bp) protein (91aa)
hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase (EC:6.3.5.9 6.3.5.-)
Probable cobyrinic acid A,C-diamide synthase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12X52_METBU
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying 30 items

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