ggKbase home page

SR-VP_26_10_2019_C_40cm_scaffold_53

Search features with annotation key words

Displaying items 1-30 of 253 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_40cm_scaffold_53_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1..1080
DNA (1080bp) protein (360aa)
ATPases of the AAA+ class n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9Q2_METCZ
AAA+ family ATPase {ECO:0000313|EMBL:KCZ71491.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ATPase
SR-VP_26_10_2019_C_40cm_scaffold_53_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

1077..1817
DNA (741bp) protein (247aa)
UPI0003D19F6C related cluster n=1 Tax=unknown RepID=UPI0003D19F6C
Metallo-beta-lactamase domain protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2188..2736
DNA (549bp) protein (183aa)
Single-stranded DNA-binding protein n=1 Tax=mine drainage metagenome RepID=T1C5T6_9ZZZZ
OB-fold nucleic acid binding protein {ECO:0000313|EMBL:KCZ73153.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
single-stranded DNA-binding protein
SR-VP_26_10_2019_C_40cm_scaffold_53_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2796..3680
DNA (885bp) protein (295aa)
RIO-like serine/threonine protein kinase fused to N-terminal HTH domain {ECO:0000313|EMBL:KCZ73154.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KCZ73154.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Serine/threonine protein kinase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468F1_METBF
Serine/threonine protein kinase
SR-VP_26_10_2019_C_40cm_scaffold_53_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3665..5647
DNA (1983bp) protein (661aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TMY1_METAC
Uncharacterized protein {ECO:0000313|EMBL:KCZ73155.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_53_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5652..5999)
DNA (348bp) protein (116aa)
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:KCZ72578.1}; EC=3.1.1.29 {ECO:0000313|EMBL:KCZ72578.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
UPI0003D1AE9B related cluster n=1 Tax=unknown RepID=UPI0003D1AE9B
SR-VP_26_10_2019_C_40cm_scaffold_53_7
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6012..6365)
DNA (354bp) protein (118aa)
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_53_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

6774..7523
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWV9_RUBXD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7572..8156)
DNA (585bp) protein (195aa)
UPI0003D1ACD3 related cluster n=1 Tax=unknown RepID=UPI0003D1ACD3
Uncharacterized protein {ECO:0000313|EMBL:KCZ70758.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_53_10
unknown

Not on your lists

comp(8244..8471)
DNA (228bp) protein (76aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_53_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(8582..9949)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. M701 RepID=V5YNL8_9BURK
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10174..10689
DNA (516bp) protein (172aa)
Methyl coenzyme M reductase, subunit C n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8THG8_METAC
Methyl-coenzyme M reductase operon protein D {ECO:0000313|EMBL:KCZ72671.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
methyl coenzyme M reductase, subunit C
SR-VP_26_10_2019_C_40cm_scaffold_53_13
unknown

Not on your lists

10701..10859
DNA (159bp) protein (53aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_53_14
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11169..12065
DNA (897bp) protein (299aa)
Iron-sulfur binding reductase n=1 Tax=uncultured archaeon RepID=Q2VP85_9ARCH
Fe-S oxidoreductase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_53_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

12062..12631
DNA (570bp) protein (190aa)
Heterodisulfide reductase subunit C n=1 Tax=uncultured archaeon GZfos29E12 RepID=Q64AT7_9ARCH
4Fe-4S ferredoxin
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_16
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

12628..13560
DNA (933bp) protein (311aa)
CoB--CoM heterodisulfide reductase (EC:1.8.98.1)
CoB--CoM heterodisulfide reductase subunit B n=1 Tax=uncultured archaeon RepID=D1JIJ4_9ARCH
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_17
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

13557..16610
DNA (3054bp) protein (1018aa)
Heterodisulfide reductase like protein, subunit A n=1 Tax=uncultured archaeon RepID=Q2VP82_9ARCH
Heterodisulfide reductase, subunit A-related polyferredoxin
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_18
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

16607..17056
DNA (450bp) protein (150aa)
Methyl viologen-reducing hydrogenase delta chain n=1 Tax=uncultured archaeon RepID=Q2VP81_9ARCH
methyl-viologen-reducing hydrogenase delta subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_19
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

17053..19059
DNA (2007bp) protein (669aa)
Heterodisulfide reductase, alpha subunit n=1 Tax=uncultured archaeon RepID=Q2VP80_9ARCH
heterodisulfide reductase, alpha subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_20
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19056..19508
DNA (453bp) protein (151aa)
UPI0003D1B6C8 related cluster n=1 Tax=unknown RepID=UPI0003D1B6C8
mvhD; methyl viologen-reducing hydrogenase delta subunit MvhD
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_53_21
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

19508..20659
DNA (1152bp) protein (384aa)
Formate dehydrogenase like protein, beta chain n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MIY6_9EURY
formate dehydrogenase like protein, beta chain
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_22
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

20663..22066
DNA (1404bp) protein (468aa)
Formate dehydrogenase like protein,alpha chain n=1 Tax=uncultured archaeon RepID=Q2VP77_9ARCH
formate dehydrogenase like protein,alpha chain
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_23
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

22072..22419
DNA (348bp) protein (116aa)
UPI0003D1AFBC related cluster n=1 Tax=unknown RepID=UPI0003D1AFBC
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_24
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22770..23357
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IAG1_METCZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFC99635.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 /; HZ254).;"
SR-VP_26_10_2019_C_40cm_scaffold_53_25
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

23357..24616
DNA (1260bp) protein (420aa)
HD superfamily phosphohydrolase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IAG0_METCZ
HD superfamily phosphohydrolase
HD superfamily phosphohydrolase {ECO:0000313|EMBL:AFC99634.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 /; HZ254).;"
SR-VP_26_10_2019_C_40cm_scaffold_53_26
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

24661..24915
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FB7_METBF
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_53_27
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

25090..26370
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TIV7_METAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM07382.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;"
SR-VP_26_10_2019_C_40cm_scaffold_53_28
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

26437..26922
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q467Y5_METBF
Uncharacterized protein {ECO:0000313|EMBL:KKG09772.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.A.1B.4.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_53_29
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(26927..27679)
DNA (753bp) protein (251aa)
F420-0:gamma-glutamyl ligase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L2M0_METHD
F420-0:gamma-glutamyl ligase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_53_30
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(27676..28908)
DNA (1233bp) protein (411aa)
Thiamine biosynthesis protein thiC n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7KE49_METBM
Thiamine biosynthesis protein ThiC {ECO:0000313|EMBL:KCZ71974.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
thiC5; Thiamine biosynthesis protein thiC
Displaying items 1-30 of 253 in total

View Taxonomy