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SR-VP_26_10_2019_C_40cm_scaffold_545

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_40cm_scaffold_545_1
unknown

Not on your lists

comp(2..97)
DNA (96bp) protein (32aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_545_2

Not on your lists

164..1105
DNA (942bp) protein (314aa)
Uncharacterized protein {ECO:0000313|EMBL:CEG11907.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
SR-VP_26_10_2019_C_40cm_scaffold_545_3

Not on your lists

1410..1610
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQ85_ARCVS
Marine sediment metagenome DNA, contig: S06H3_S26899 {ECO:0000313|EMBL:GAI50620.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_545_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1607..1936
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FM89_9EURY
PemK-like protein {ECO:0000313|EMBL:KCZ72220.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_545_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2082..2576)
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos32E4 RepID=Q64AE6_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KCZ72956.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_C_40cm_scaffold_545_6
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2599..2850)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVH6_METMA
Uncharacterized protein {ECO:0000313|EMBL:KGK97702.1}; TaxID=2226 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_545_7
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2857..3765)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVH5_METMA
Uncharacterized protein {ECO:0000313|EMBL:KGK97701.1}; TaxID=2226 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_545_8
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3772..4560)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVH4_METMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB65884.1}; TaxID=213585 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei S-6.;"
SR-VP_26_10_2019_C_40cm_scaffold_545_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

4743..4943
DNA (201bp) protein (67aa)
Protein translocase subunit SecE n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=SECE_METBU
secE; preprotein translocase subunit SecE
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_545_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


4940..5419
DNA (480bp) protein (160aa)
Transcription elongation factor Spt5 n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MEB7_9EURY
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nusG; transcription antitermination protein NusG
SR-VP_26_10_2019_C_40cm_scaffold_545_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists


5445..5927
DNA (483bp) protein (161aa)
UPI0003D1A188 related cluster n=1 Tax=unknown RepID=UPI0003D1A188
rpl11p; 50S ribosomal protein L11P
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_545_12
unknown

Not on your lists

6006..6164
DNA (159bp) protein (53aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_545_13
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6115..6534
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YXY1_METPS
Uncharacterized protein {ECO:0000313|EMBL:KKH46528.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.A.2.2.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_545_14
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

6544..11322
DNA (4779bp) protein (1593aa)
UPI0003D1A3B9 related cluster n=1 Tax=unknown RepID=UPI0003D1A3B9
APHP domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_545_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11353..12261)
DNA (909bp) protein (303aa)
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:KCZ70341.1}; EC=1.8.1.9 {ECO:0000313|EMBL:KCZ70341.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
thioredoxin reductase n=1 Tax=Desulfobacter curvatus RepID=UPI00037A590B
trxB1; thioredoxin reductase
SR-VP_26_10_2019_C_40cm_scaffold_545_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12335..14134)
DNA (1800bp) protein (600aa)
UvrABC system protein C n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RXX6_THEOJ
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
excinuclease ABC subunit C
SR-VP_26_10_2019_C_40cm_scaffold_545_17
unknown

Not on your lists

14217..14435
DNA (219bp) protein (73aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_545_18
Spongiibacter sp. IMCC21906, Spongiibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14450..14950)
DNA (501bp) protein (167aa)
Uncharacterized protein {ECO:0000313|EMBL:AKH69020.1}; TaxID=1620392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Spongiibacter.;" source="Spongiibacter sp. IMCC21906.;"
SR-VP_26_10_2019_C_40cm_scaffold_545_19
unknown

Not on your lists

comp(15081..15329)
DNA (249bp) protein (83aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_545_20
unknown

Not on your lists

comp(15307..15438)
DNA (132bp) protein (44aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_545_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15445..18261)
DNA (2817bp) protein (939aa)
UvrABC system protein A n=1 Tax=Thermincola potens (strain JR) RepID=D5XCB4_THEPJ
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
excinuclease ABC subunit A
SR-VP_26_10_2019_C_40cm_scaffold_545_22
unknown

Not on your lists

18412..18522
DNA (111bp) protein (37aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_545_23

Not on your lists

18558..20084
DNA (1527bp) protein (509aa)
Polysaccharide biosynthesis protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TRW4_METAC id=5103373 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative polysaccharide biosynthesis protein {ECO:0000313|EMBL:CEG11661.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
polysaccharide biosynthesis-like protein
SR-VP_26_10_2019_C_40cm_scaffold_545_24
Roseovarius sp. BRH_c41, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20079..20852)
DNA (774bp) protein (258aa)
Methylase involved in ubiquinone/menaquinone biosynthesis-like protein n=1 Tax=Roseovarius sp. 217 RepID=A3W0V2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KJS40913.1}; TaxID=1629709 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. BRH_c41.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_545_25
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(20854..22005)
DNA (1152bp) protein (384aa)
Putative glycosyltransferase n=1 Tax=planctomycete KSU-1 PF5_9PLAN">RepID=I3IPF5_9PLAN
glucuronic acid transferase WabG
Tax=CG_Micra_05
SR-VP_26_10_2019_C_40cm_scaffold_545_26
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22002..22706)
DNA (705bp) protein (235aa)
Methylase/methyltransferase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SAJ8_LEPBA
methylase/methyltransferase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
SR-VP_26_10_2019_C_40cm_scaffold_545_27
unknown

Not on your lists

comp(22703..22825)
DNA (123bp) protein (41aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_545_28
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22822..23757)
DNA (936bp) protein (312aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Chlorobium phaeobacteroides (strain BS1) RepID=B3EN64_CHLPB
NAD-dependent epimerase {ECO:0000313|EMBL:KIE44171.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
NAD-dependent epimerase/dehydratase
SR-VP_26_10_2019_C_40cm_scaffold_545_29
Methanobacterium sp. MB1, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23754..24701)
DNA (948bp) protein (316aa)
acbB; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:CDG64416.1}; EC=4.2.1.46 {ECO:0000313|EMBL:CDG64416.1};; TaxID=1379702 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium sp. MB1.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Methanobacterium sp. MB1 RepID=U6E9R0_9EURY
SR-VP_26_10_2019_C_40cm_scaffold_545_30
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24745..25473)
DNA (729bp) protein (243aa)
spore coat protein n=1 Tax=Bacillus sp. 10403023 RepID=UPI00028863FE
nucleotidyl transferase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying items 1-30 of 69 in total

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