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SR-VP_26_10_2019_C_40cm_scaffold_912

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_40cm_scaffold_912_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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343..963
DNA (621bp) protein (207aa)
PyrE-like protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMW4_METH6
PyrE-like protein {ECO:0000256|HAMAP-Rule:MF_01214}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Phosphoribosyltransferase
SR-VP_26_10_2019_C_40cm_scaffold_912_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

967..1476
DNA (510bp) protein (170aa)
Putative membrane-bound metal-dependent hydrolase (DUF457) {ECO:0000313|EMBL:KCZ71350.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_C_40cm_scaffold_912_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1473..2939
DNA (1467bp) protein (489aa)
Probable cobyric acid synthase n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1QF03_METMZ
Probable cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Cobyric acid synthase
SR-VP_26_10_2019_C_40cm_scaffold_912_4
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2939..3883
DNA (945bp) protein (315aa)
ribose 1,5-bisphosphate isomerase (EC:5.3.1.23 5.3.1.-)
Ribose 1,5-bisphosphate isomerase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E956_METMS
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_912_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3885..4553)
DNA (669bp) protein (223aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Triosephosphate isomerase n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1QIA5_METMZ
Triosephosphate isomerase
SR-VP_26_10_2019_C_40cm_scaffold_912_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4563..5333)
DNA (771bp) protein (257aa)
UPI0003D1B117 related cluster n=1 Tax=unknown RepID=UPI0003D1B117
RecA-superfamily ATPase possibly involved in signal transduction {ECO:0000313|EMBL:KCZ72729.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative circadian clock protein KaiC
SR-VP_26_10_2019_C_40cm_scaffold_912_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5531..6235
DNA (705bp) protein (235aa)
Phosphoribosyltransferase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MNH5_9EURY
Putative phosphoribosyltransferase {ECO:0000313|EMBL:KCZ72728.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
phosphoribosyltransferase
SR-VP_26_10_2019_C_40cm_scaffold_912_8
unknown

Not on your lists

6240..7094
DNA (855bp) protein (285aa)
S-methyl-5'-thioadenosine phosphorylase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MC73_9EURY
methylthioadenosine phosphorylase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_912_9
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7167..7673
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKI2_METZD
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_912_10
unknown

Not on your lists

7674..8279
DNA (606bp) protein (202aa)
UPI0003D1B9AE related cluster n=1 Tax=unknown RepID=UPI0003D1B9AE
6-phospho-3-hexuloisomerase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_912_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8279..9385
DNA (1107bp) protein (369aa)
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:KCZ72724.1}; EC=2.6.1.1 {ECO:0000313|EMBL:KCZ72724.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Aminotransferase class I and II n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EB95_METEZ
class I/II aminotransferase
SR-VP_26_10_2019_C_40cm_scaffold_912_12
unknown

Not on your lists

comp(9507..9995)
DNA (489bp) protein (163aa)
Putative ATP-dependent Lon protease n=1 Tax=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) RepID=B9L6H8_NAUPA
Marine sediment metagenome DNA, contig: S01H4_C00907 {ECO:0000313|EMBL:GAG58610.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative ATP-dependent Lon protease
SR-VP_26_10_2019_C_40cm_scaffold_912_13
unknown

Not on your lists

10383..10673
DNA (291bp) protein (97aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN19619.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SR-VP_26_10_2019_C_40cm_scaffold_912_14
unknown

Not on your lists

comp(10783..11598)
DNA (816bp) protein (272aa)
UPI0003D1B8D8 related cluster n=1 Tax=unknown RepID=UPI0003D1B8D8
potassium/copper-transporting ATPase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_912_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11838..12455
DNA (618bp) protein (206aa)
NADPH-dependent FMN reductase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAH4_METEZ
Multimeric flavodoxin WrbA {ECO:0000313|EMBL:KCZ70316.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
NADPH-dependent FMN reductase
SR-VP_26_10_2019_C_40cm_scaffold_912_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12475..13032
DNA (558bp) protein (186aa)
Archaeoflavoprotein AfpA n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RHA2_METVM
Archaeoflavoprotein AfpA {ECO:0000313|EMBL:KCZ70315.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
archaeoflavoprotein AfpA
SR-VP_26_10_2019_C_40cm_scaffold_912_17
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13034..13564)
DNA (531bp) protein (177aa)
Phosphodiesterase, MJ0936 family n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XLS0_METZD
phosphodiesterase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_912_18
unknown

Not on your lists

comp(13581..14921)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=2 Tax=Pyrococcus furiosus RepID=I6V017_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_912_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14998..15585
DNA (588bp) protein (196aa)
Methanogen homoaconitase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; Short=HACN {ECO:0000256|HAMAP-Rule:MF_01032};; EC=4.2.1.114 {ECO:0000256|HAMAP-Rule:MF_01032};; Homoaconitate hydratase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Methanogen homoaconitase small subunit n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPX4_METZD
3-isopropylmalate dehydratase small subunit
SR-VP_26_10_2019_C_40cm_scaffold_912_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15582..16457
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FW3_METBF
Uncharacterized protein {ECO:0000313|EMBL:KCZ72145.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_912_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16454..17461
DNA (1008bp) protein (336aa)
Isopropylmalate/isohomocitrate dehydrogenase {ECO:0000313|EMBL:KCZ72144.1}; EC=1.1.1.- {ECO:0000313|EMBL:KCZ72144.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
3-isopropylmalate dehydrogenase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TJN2_METAC
leuB; 3-isopropylmalate dehydrogenase
SR-VP_26_10_2019_C_40cm_scaffold_912_22
unknown

Not on your lists

17646..20186
DNA (2541bp) protein (847aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EC53_METMS
PAS/PAC sensor signal transduction histidine kinase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_912_23
unknown

Not on your lists

comp(20178..21152)
DNA (975bp) protein (325aa)
Phosphate transporter n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAM5_METMS
phosphate transporter
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_912_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21236..21988)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYP2_METHD
Uncharacterized protein {ECO:0000313|EMBL:KCZ72142.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_912_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21992..22285)
DNA (294bp) protein (98aa)
PRC-barrel domain protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQC4_METZD
Uncharacterized protein {ECO:0000313|EMBL:KCZ72141.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
PRC-barrel domain-containing protein
SR-VP_26_10_2019_C_40cm_scaffold_912_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22383..24080
DNA (1698bp) protein (566aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022, ECO:0000256|SAAS:SAAS00016154}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022, ECO:0000256|SAAS:SAAS00088701};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Glutamate--tRNA ligase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MI15_9EURY
gltX; glutamyl-tRNA synthetase
SR-VP_26_10_2019_C_40cm_scaffold_912_27
unknown

Not on your lists

24113..24820
DNA (708bp) protein (236aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_912_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24893..27337)
DNA (2445bp) protein (815aa)
DNA/RNA helicase, superfamily II {ECO:0000313|EMBL:KCZ72628.1}; EC=3.6.1.- {ECO:0000313|EMBL:KCZ72628.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1AC73 related cluster n=1 Tax=unknown RepID=UPI0003D1AC73
DNA/RNA helicase, superfamily II
SR-VP_26_10_2019_C_40cm_scaffold_912_29
unknown

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comp(27467..33394)
DNA (5928bp) protein (1976aa)
Cell surface glycoprotein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BW6_METBF
cell surface protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_912_30
unknown

Not on your lists

comp(33507..33662)
DNA (156bp) protein (52aa)

This feature has no annotations

Displaying items 1-30 of 45 in total

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