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SR-VP_26_10_2019_C_40cm_scaffold_4110

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_40cm_scaffold_4110_1
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3..995)
DNA (993bp) protein (331aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BIF1_PETMO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB59964.1}; TaxID=1434106 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 227.;"
SR-VP_26_10_2019_C_40cm_scaffold_4110_2
unknown

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1115..1258
DNA (144bp) protein (48aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_4110_3
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

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1297..1632
DNA (336bp) protein (112aa)
Putative nucleotidyl transferase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YWW4_METPS
putative nucleotidyl transferase
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
SR-VP_26_10_2019_C_40cm_scaffold_4110_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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1763..3598
DNA (1836bp) protein (612aa)
Metal-dependent phosphohydrolase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MEP9_9EURY
metal-dependent phosphohydrolase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_4110_5
unknown

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3659..3763
DNA (105bp) protein (35aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_4110_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(3778..4020)
DNA (243bp) protein (81aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_4110_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4444..6207)
DNA (1764bp) protein (588aa)
UPI0003D1B337 related cluster n=1 Tax=unknown RepID=UPI0003D1B337
Probable translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
translation initiation factor IF-2
SR-VP_26_10_2019_C_40cm_scaffold_4110_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6263..6694)
DNA (432bp) protein (144aa)
Nucleoside diphosphate kinase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MIS9_9EURY
ndk; nucleoside diphosphate kinase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_4110_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(6722..6916)
DNA (195bp) protein (65aa)
50S ribosomal protein L24e n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FIJ0_9EURY
50S ribosomal protein L24E
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_4110_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(6921..7136)
DNA (216bp) protein (72aa)
UPI0003D1BB6D related cluster n=1 Tax=unknown RepID=UPI0003D1BB6D
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
30S ribosomal protein S28e
SR-VP_26_10_2019_C_40cm_scaffold_4110_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(7141..7509)
DNA (369bp) protein (123aa)
50S ribosomal protein L7Ae n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BUT5_METCG
50S ribosomal protein L7Ae {ECO:0000256|HAMAP-Rule:MF_00326}; Ribosomal protein L8e {ECO:0000256|HAMAP-Rule:MF_00326}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rpl7ae; 50S ribosomal protein L7Ae
SR-VP_26_10_2019_C_40cm_scaffold_4110_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7602..8498)
DNA (897bp) protein (299aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71891.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_C_40cm_scaffold_4110_13
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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8572..9627
DNA (1056bp) protein (352aa)
Anthranilate phosphoribosyltransferase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4ME77_9EURY
anthranilate phosphoribosyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_4110_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9868..10512
DNA (645bp) protein (215aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1AC78 related cluster n=1 Tax=unknown RepID=UPI0003D1AC78
trpF; phosphoribosylanthranilate isomerase
SR-VP_26_10_2019_C_40cm_scaffold_4110_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10509..12086
DNA (1578bp) protein (526aa)
Anthranilate synthase, component I {ECO:0000313|EMBL:KCZ71888.1}; EC=4.1.3.27 {ECO:0000313|EMBL:KCZ71888.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBI9_METEZ
SR-VP_26_10_2019_C_40cm_scaffold_4110_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12083..12670
DNA (588bp) protein (196aa)
Anthranilate synthase, component II {ECO:0000313|EMBL:KCZ71887.1}; EC=4.1.3.27 {ECO:0000313|EMBL:KCZ71887.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Anthranilate synthase component II n=1 Tax=uncultured archaeon GZfos26E7 RepID=Q64BX2_9ARCH
glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
SR-VP_26_10_2019_C_40cm_scaffold_4110_trna_1
unknown

Not on your lists

12833..12939
DNA (107bp)
transferRNA Glu
SR-VP_26_10_2019_C_40cm_scaffold_4110_17
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(13134..13322)
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VX8_METBU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE52398.1}; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 /; ACE-M).;"
Displaying 18 items

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