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SR-VP_26_10_2019_C_40cm_scaffold_1168

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_40cm_scaffold_1168_1
unknown

Not on your lists

comp(1..258)
DNA (258bp) protein (86aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_1168_trna_1
unknown

Not on your lists

566..637
DNA (72bp)
transferRNA Cys
SR-VP_26_10_2019_C_40cm_scaffold_1168_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(609..863)
DNA (255bp) protein (85aa)
NMT1/THI5-like domain-containing protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CQ33_9BURK
ABC transporter
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1168_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1013..1246)
DNA (234bp) protein (78aa)
Putative redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:KCZ70948.1}; EC=2.8.1.- {ECO:0000313|EMBL:KCZ70948.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SirA family protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAN3_METMS
SirA family protein
SR-VP_26_10_2019_C_40cm_scaffold_1168_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(1261..2295)
DNA (1035bp) protein (345aa)
NMT1/THI5 like domain protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GH72_METPE
NMT1/THI5 like domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1168_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(2308..3333)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SW42_SYNGF
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1168_6
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3344..4132)
DNA (789bp) protein (263aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GH83_METPE
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACL16488.1}; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c).;"
SR-VP_26_10_2019_C_40cm_scaffold_1168_7
Bacillus sp. 1NLA3E, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4137..4988)
DNA (852bp) protein (284aa)
ABC transporter ATP-binding protein n=1 Tax=Bacillus sp. 1NLA3E RepID=N0AMN5_9BACI
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AGK52569.1}; TaxID=666686 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. 1NLA3E.;"
SR-VP_26_10_2019_C_40cm_scaffold_1168_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5080..6471)
DNA (1392bp) protein (464aa)
2-hydroxyglutaryl-CoA dehydratase, D-component n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8A9_GEOUR
2-hydroxyglutaryl-CoA dehydratase subunit D
2-hydroxyglutaryl-CoA dehydratase, D-component {ECO:0000313|EMBL:ABQ28027.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
SR-VP_26_10_2019_C_40cm_scaffold_1168_9
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6468..7655)
DNA (1188bp) protein (396aa)
2-hydroxyglutaryl-CoA dehydratase D-component n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0STR2_SYNGF
2-hydroxyglutaryl-CoA dehydratase subunit D
2-hydroxyglutaryl-CoA dehydratase D-component {ECO:0000313|EMBL:ADY55352.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
SR-VP_26_10_2019_C_40cm_scaffold_1168_10
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7658..8464)
DNA (807bp) protein (269aa)
CoA-substrate-specific enzyme activase n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GH86_METPE
CoA-substrate-specific enzyme activase
CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:ACL16491.1}; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c).;"
SR-VP_26_10_2019_C_40cm_scaffold_1168_11
unknown

Not on your lists

comp(8604..8834)
DNA (231bp) protein (77aa)

This feature has no annotations

SR-VP_26_10_2019_C_40cm_scaffold_1168_12
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(9029..10273)
DNA (1245bp) protein (415aa)
UPI0003D1C31E related cluster n=1 Tax=unknown RepID=UPI0003D1C31E
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1168_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10581..10799)
DNA (219bp) protein (73aa)
Putative redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:KCZ70950.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SirA family protein
SirA-like protein id=14431446 bin=bin3_NC10 species=Morganella morganii genus=Morganella taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
SR-VP_26_10_2019_C_40cm_scaffold_1168_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11978..12316)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=1 Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z7G0_DEHE1
Nitrogen regulatory protein PII {ECO:0000313|EMBL:KCZ72261.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nitrogen regulatory protein P-II
SR-VP_26_10_2019_C_40cm_scaffold_1168_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12327..13628)
DNA (1302bp) protein (434aa)
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Ammonium transport protein (Amt family) id=4372459 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
ammonium transporter
SR-VP_26_10_2019_C_40cm_scaffold_1168_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13785..14609
DNA (825bp) protein (275aa)
Nitrogenase iron protein {ECO:0000256|HAMAP-Rule:MF_00533}; EC=1.18.6.1 {ECO:0000256|HAMAP-Rule:MF_00533};; Nitrogenase Fe protein {ECO:0000256|HAMAP-Rule:MF_00533}; Nitrogenase component II {ECO:0000256|HAMAP-Rule:MF_00533}; Nitrogenase reductase {ECO:0000256|HAMAP-Rule:MF_00533}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nifH; nitrogenase reductase (EC:1.18.6.1)
Dinitrogenase reductase NifH (Fragment) n=3 Tax=root RepID=D5I156_9ZZZZ
SR-VP_26_10_2019_C_40cm_scaffold_1168_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14614..14931
DNA (318bp) protein (106aa)
Nitrogen regulatory protein PII n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IKU1_THETR
Nitrogen regulatory protein PII {ECO:0000313|EMBL:KCZ73695.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nitrogen regulatory protein PII
SR-VP_26_10_2019_C_40cm_scaffold_1168_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14940..15317
DNA (378bp) protein (126aa)
Nitrogen regulatory protein PII n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WJI2_DESOD
Nitrogen regulatory protein PII {ECO:0000313|EMBL:KCZ73694.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nitrogen regulatory protein PII
SR-VP_26_10_2019_C_40cm_scaffold_1168_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15448..16818
DNA (1371bp) protein (457aa)
Nitrogenase protein alpha chain {ECO:0000256|RuleBase:RU004022}; EC=1.18.6.1 {ECO:0000256|RuleBase:RU004022};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Dinitrogenase alpha subunit n=1 Tax=uncultured microorganism RepID=D5I174_9ZZZZ
nitrogenase component I subunit alpha
SR-VP_26_10_2019_C_40cm_scaffold_1168_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16819..18180
DNA (1362bp) protein (454aa)
Nitrogenase molybdenum-iron protein {ECO:0000313|EMBL:KCZ73692.1}; EC=1.18.6.1 {ECO:0000313|EMBL:KCZ73692.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
nitrogenase (EC:1.18.6.1)
Nitrogenase n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T6J3_METSL
SR-VP_26_10_2019_C_40cm_scaffold_1168_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18190..18459
DNA (270bp) protein (90aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73691.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Ferredoxin III, nif-specific id=1928400 bin=GWD2_Nitrospirae-related_57_8 species=Fischerella sp. JSC-11 genus=Fischerella taxon_order=Stigonematales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
ferredoxin III
SR-VP_26_10_2019_C_40cm_scaffold_1168_22
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

18538..19425
DNA (888bp) protein (296aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D3I6_METSW
pyridoxamine 5'-phosphate oxidase family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1168_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19422..20123
DNA (702bp) protein (234aa)
Glutamine amidotransferase class-I n=1 Tax=Thermincola potens (strain JR) RepID=D5XDD1_THEPJ
GMP synthase family protein {ECO:0000313|EMBL:KCZ73688.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
glutamine amidotransferase
SR-VP_26_10_2019_C_40cm_scaffold_1168_24
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

20135..20869
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XE72_9CHRO
protein of unknown function DUF81
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1168_25
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

21124..21501
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036FC260
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RBG_16_Archaea_50_20_curated
SR-VP_26_10_2019_C_40cm_scaffold_1168_26
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

Not on your lists

21578..21901
DNA (324bp) protein (108aa)
hypothetical protein id=14632276 bin=bin9_gal15 species=Leptospira vanthielii genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=bin9_gal15 organism_group=GAL15
Activator of Hsp90 ATPase 1 family protein
Tax=RBG_13_Chloroflexi_52_14_curated
SR-VP_26_10_2019_C_40cm_scaffold_1168_27
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

22376..22975
DNA (600bp) protein (200aa)
Transcriptional regulator n=1 Tax=halophilic archaeon J07HX64 RepID=U1QS71_9EURY
lrp; Lrp/AsnC family transcription regulator
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1168_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

23125..23349
DNA (225bp) protein (75aa)
Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Bacillus megaterium WSH-002 RepID=G2RST7_BACME
Putative redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:KCZ72815.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
yrkI; PAS/PAC sensor-containing diguanylate cyclase
SR-VP_26_10_2019_C_40cm_scaffold_1168_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

23353..24003
DNA (651bp) protein (217aa)
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:KCZ71819.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
methyltransferase type 11 id=14632213 bin=bin9_gal15 species=Nitrosomonas sp. AL212 genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
methyltransferase type 11
Displaying items 1-30 of 42 in total

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