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SR-VP_26_10_2019_C_40cm_scaffold_1243

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_40cm_scaffold_1243_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2..661
DNA (660bp) protein (220aa)
S-layer-related duplication domain protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E9K3_METMS
PGF-CTERM archaeal protein-sorting signal {ECO:0000313|EMBL:KCZ72356.1}; Flags: Fragment;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_1243_2
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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743..1933
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RCI6_METFO
Uncharacterized protein {ECO:0000313|EMBL:EKF86019.1}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium formicicum DSM 3637.;"
SR-VP_26_10_2019_C_40cm_scaffold_1243_3
unknown

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comp(2061..2849)
DNA (789bp) protein (263aa)
ABC-2 type transporter n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WR56_METH6
ABC transporter
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1243_4
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2850..4964)
DNA (2115bp) protein (705aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAR7_METEZ
PAS/PAC sensor signal transduction histidine kinase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_C_40cm_scaffold_1243_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4968..5231)
DNA (264bp) protein (88aa)
NADH:flavin oxidoreductase {ECO:0000313|EMBL:KCZ72491.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_C_40cm_scaffold_1243_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5326..5727
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YUR5_METPS
UPF0146 protein ANME2D_00917 {ECO:0000256|HAMAP-Rule:MF_00341}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_1243_7
unknown

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5853..6557
DNA (705bp) protein (235aa)
RecA-superfamily ATPase implicated in signal transduction n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7T7_METMS
RecA-superfamily ATPase implicated in signal transduction
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1243_8
unknown

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6559..7728
DNA (1170bp) protein (390aa)
Small GTP-binding protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQ28_ARCVS
small GTP-binding protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1243_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7728..8096
DNA (369bp) protein (123aa)
Roadblock/LC7 family protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQ29_ARCVS
Uncharacterized protein {ECO:0000313|EMBL:KCZ72487.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Roadblock/LC7 family protein
SR-VP_26_10_2019_C_40cm_scaffold_1243_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8093..8347
DNA (255bp) protein (85aa)
Putative RNA-binding protein containing KH domain, possibly ribosomal protein {ECO:0000313|EMBL:KCZ72486.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein; K07574 RNA-binding protein id=24614334 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_1243_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8482..8931
DNA (450bp) protein (150aa)
30S ribosomal protein S19e n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WQU7_METH6
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
30S ribosomal protein S19E
SR-VP_26_10_2019_C_40cm_scaffold_1243_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8934..9272
DNA (339bp) protein (113aa)
DNA-binding protein Mpsy_0496 n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MB11_9EURY
DNA-binding protein ANME2D_00911 {ECO:0000256|HAMAP-Rule:MF_00026}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
DNA-binding TFAR19-related protein
SR-VP_26_10_2019_C_40cm_scaffold_1243_13
unknown

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comp(9259..10476)
DNA (1218bp) protein (406aa)
Cysteine--tRNA ligase id=5799784 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
cysteinyl-tRNA synthetase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1243_14
unknown

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comp(10476..11234)
DNA (759bp) protein (253aa)
Putative ABC transporter permease protein n=1 Tax=uncultured crenarchaeote RepID=Q702C6_9CREN
ABC efflux transporter, permease protein, Drug Exporter-1 (DrugE1) Family
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1243_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11231..12184)
DNA (954bp) protein (318aa)
Daunorubicin resistance ABC transporter ATPase subunit n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I5D5_METB6
Daunorubicin resistance ABC transporter ATP-binding subunit {ECO:0000313|EMBL:KCZ72482.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ABC efflux transporter, ATP-binding protein, Drug Exporter-1 (DrugE1) Family
SR-VP_26_10_2019_C_40cm_scaffold_1243_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12272..13516
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q464V9_METBF
Uncharacterized protein {ECO:0000313|EMBL:KCZ71159.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Transcriptional regulator
SR-VP_26_10_2019_C_40cm_scaffold_1243_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13659..14675
DNA (1017bp) protein (339aa)
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4 {ECO:0000256|HAMAP-Rule:MF_00200};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RNA 3'-terminal-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=RTCA_METBU
SR-VP_26_10_2019_C_40cm_scaffold_1243_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14801..15142)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYG6_METPS
B-block binding subunit of TFIIIC {ECO:0000313|EMBL:KCZ70421.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_1243_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15144..15368)
DNA (225bp) protein (75aa)
Small nuclear riboprotein-like protein n=1 Tax=uncultured archaeon RepID=Q2Y4N9_9ARCH
Small nuclear ribonucleoprotein {ECO:0000313|EMBL:KCZ70422.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Sm ribonucleoprotein-like protein
SR-VP_26_10_2019_C_40cm_scaffold_1243_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15397..16122)
DNA (726bp) protein (242aa)
UPI0003D1AF63 related cluster n=1 Tax=unknown RepID=UPI0003D1AF63
Archaeoflavoprotein, MJ0208 family {ECO:0000313|EMBL:KCZ70423.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
flavoprotein
SR-VP_26_10_2019_C_40cm_scaffold_1243_21
unknown

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16272..17888
DNA (1617bp) protein (539aa)
Phytoene dehydrogenase-related protein id=24392620 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Archaeoglobus sulfaticallidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1243_22
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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17989..18552
DNA (564bp) protein (188aa)
Flavoredoxin n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TTU7_METAC
Flavoredoxin {ECO:0000313|EMBL:AKB80291.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
flavoredoxin
SR-VP_26_10_2019_C_40cm_scaffold_1243_23
unknown

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18603..19343
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GCU1_9BACT
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1243_24
unknown

Not on your lists

comp(19462..20223)
DNA (762bp) protein (254aa)
Dienelactone hydrolase n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WL46_METH6
Dienelactone hydrolase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1243_25
unknown

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comp(20348..21205)
DNA (858bp) protein (286aa)
Pirin domain protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G737_GEOUR
pirin domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_40cm_scaffold_1243_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21796..23544
DNA (1749bp) protein (583aa)
Cytochrome c, 8 heme-binding sites n=3 Tax=Bacteria RepID=D7AL56_GEOSK
IPT/TIG domain-containing protein {ECO:0000313|EMBL:KCZ73597.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
omcZ; cytochrome c, 8 heme-binding sites
SR-VP_26_10_2019_C_40cm_scaffold_1243_27
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

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comp(23753..25267)
DNA (1515bp) protein (505aa)
Catalase (EC:1.11.1.6)
Catalase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=CATA_METBF
Tax=RBG_16_Spirochaetes_49_21_curated
SR-VP_26_10_2019_C_40cm_scaffold_1243_28
Methanoculleus sp. MH98A, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(25278..25544)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LLH9_METBM
Uncharacterized protein {ECO:0000313|EMBL:KDE55941.1}; TaxID=1495314 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus sp. MH98A.;"
hypothetical protein
SR-VP_26_10_2019_C_40cm_scaffold_1243_29
RBG_16_OP11_Woesebacteria_34_12_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(25557..25991)
DNA (435bp) protein (145aa)
Putative flavodoxin n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYG4_METPS
putative flavodoxin
Tax=RBG_16_OP11_Woesebacteria_34_12_curated
SR-VP_26_10_2019_C_40cm_scaffold_1243_30
RBG_16_RIF_WS3X_71_46_curated, Latescibacteria, Bacteria

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26336..26737
DNA (402bp) protein (134aa)
Dual specificity protein phosphatase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B009_HERA2 id=5224410 bin=16ft_combo_ws3_JS1 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying items 1-30 of 42 in total

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