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SR-VP_26_10_2019_C_40cm_scaffold_6158_8

Organism: SR-VP_26_10_2019_C_40cm_Methanoperedens_44_15

near complete RP 30 / 55 MC: 3 BSCG 27 / 51 ASCG 37 / 38 MC: 1
Location: comp(5452..6456)

Top 3 Functional Annotations

Value Algorithm Source
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01081}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 330.0
  • Bit_score: 544
  • Evalue 6.50e-152
Probable tRNA pseudouridine synthase B n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMQ1_METH6 similarity UNIREF
DB: UNIREF100
  • Identity: 62.2
  • Coverage: 328.0
  • Bit_score: 431
  • Evalue 7.40e-118
putative tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 328.0
  • Bit_score: 431
  • Evalue 2.10e-118

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1005
ATGTTTAACATGAACCAGTTACCTTCAGAAACAAAGAGAGAGATACTGATAAAATCTGAGGACTCCACGGACGAGCGGTTTGGGAAACGGCCAAAAGACAGGCTGATACAGGAATATATTCGAAAAGGAGCAATTAACCTTGATAAGCCTGCCGGGCCCACAAGTCACGAGGTCACGTCCTGGGTGAAGAAAATCCTGGAGCTTGAGAAAGCTGGACACAGCGGAACCCTTGATCCAAATGTTACAGGATTGCTTCCCATTCTGCTGGAGGATGCCACCAGAGCCGTGGATGCACTTCTTACAGCGGGCAAGGAATATGTGTGCATGATGAAACTTCACTCCGTCGTGCCCGAAAAGACGATAAGAAGCGTGTTTTCCGACTTTACAGGCCCGATATACCAGAAGCCTTCCATAAAATCCGCAGTAAAAAGGGAAACAAGGATAAGGAATATTTATTATCTGGAGTTTATGGAACTCGATGGCGAAAATGTGCTTTTCAGGGCAGGATGTGAGGCAGGGACGTATATCAGGAAGCTTTGCCACGATATGGGCATGGCTCTGGGAACAGGCGCGCATATGCAGGAACTGCGGCGTACAAAGAGCGGTCCTTTTCGCGAGGATGAGACCCTTGTCACTCTCCACGACCTGAAAGATGCGTATGTAGAATGGAAGGAAAGCGACAAAGAAGGATCATTGAGGAAAGTGATAAGTCCCCTGGAGTATGCCCTTTCCCACCTTCCAAAGATAGTGATCCGGGATAATGCCGTTGACGCCATCTGCCACGGGGCAAGCCTGGCTGCGCCGGGTGTTCTCTCGCTCGAGACGGGGATCGAGAAAGGGGATACCGTTGCGATATTTACGTTGAAAGGCGAAGCAGTGGCTTTCGGCCAGGCGAAGATGAAGTCTGCCGAAATTCTAAGAGCGGCGACAGGCATAGTGGCGGCGACAGACAGGGTGCTTCTTGAACCCGGCACTTATCCCAAAGGATGGAAGGCAAAAGCATAA
PROTEIN sequence
Length: 335
MFNMNQLPSETKREILIKSEDSTDERFGKRPKDRLIQEYIRKGAINLDKPAGPTSHEVTSWVKKILELEKAGHSGTLDPNVTGLLPILLEDATRAVDALLTAGKEYVCMMKLHSVVPEKTIRSVFSDFTGPIYQKPSIKSAVKRETRIRNIYYLEFMELDGENVLFRAGCEAGTYIRKLCHDMGMALGTGAHMQELRRTKSGPFREDETLVTLHDLKDAYVEWKESDKEGSLRKVISPLEYALSHLPKIVIRDNAVDAICHGASLAAPGVLSLETGIEKGDTVAIFTLKGEAVAFGQAKMKSAEILRAATGIVAATDRVLLEPGTYPKGWKAKA*