ggKbase home page

SR-VP_26_10_2019_C_20cm_scaffold_22321

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_20cm_scaffold_22321_1
unknown

Not on your lists

1..969
DNA (969bp) protein (323aa)
amidase (EC:3.5.1.4)
Amidase family protein n=1 Tax=Paenibacillus alvei TS-15 RepID=S9SLK9_PAEAL
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_C_20cm_scaffold_22321_2
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

1061..2323
DNA (1263bp) protein (421aa)
Aminopeptidase id=3419769 bin=GWC2_Spirochaete_52_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Tax=GWC2_Spirochaetes_52_13_curated
SR-VP_26_10_2019_C_20cm_scaffold_22321_3
unknown

Not on your lists

2299..2856
DNA (558bp) protein (186aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_22321_4

Not on your lists

comp(3069..3719)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YWP5_METPS
hypothetical protein
Tax=GWC2_SYX_53_9_curated
SR-VP_26_10_2019_C_20cm_scaffold_22321_5
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(4123..5166)
DNA (1044bp) protein (348aa)
S-methyl-5-thioribose-1-phosphate isomerase (EC:5.3.1.23)
Putative methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; MTNA-like protein {ECO:0000256|HAMAP-Rule:MF_01678}; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Putative methylthioribose-1-phosphate isomerase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHQ3_NITGG
SR-VP_26_10_2019_C_20cm_scaffold_22321_6

Not on your lists

5260..5838
DNA (579bp) protein (193aa)
tRNA splicing endonuclease {ECO:0000313|EMBL:AIE98672.1}; EC=4.6.1.16 {ECO:0000313|EMBL:AIE98672.1};; TaxID=1455976 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_06_C02.;"
tRNA intron endonuclease n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KM79_9ARCH
tRNA intron endonuclease
SR-VP_26_10_2019_C_20cm_scaffold_22321_7
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

5861..6064
DNA (204bp) protein (68aa)
4-hydroxybenzoate octaprenyltransferase (EC:2.5.1.-)
4-hydroxybenzoate octaprenyltransferase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4Y1_9ARCH
Tax=RBG_16_Thaumarchaeota_49_8_curated
Displaying 7 items

View Taxonomy