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SR-VP_26_10_2019_C_20cm_scaffold_3706

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_20cm_scaffold_3706_1
unknown

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1..315
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-F05 RepID=UPI0003689078
SR-VP_26_10_2019_C_20cm_scaffold_3706_2
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(337..1023)
DNA (687bp) protein (229aa)
uridylate kinase (EC:2.7.4.-)
Uridylate kinase n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=PYRH_HYPBU
Tax=RBG_13_Bathyarchaeota_46_16b_curated
SR-VP_26_10_2019_C_20cm_scaffold_3706_3
uncultured Candidatus Nitrosocaldus sp., Candidatus Nitrosocaldus, Crenarchaeota, Archaea

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1160..2419
DNA (1260bp) protein (420aa)
Peptide chain release factor eRF subunit 1 n=2 Tax=Crenarchaeota RepID=H5SVY6_9CREN
Peptide chain release factor aRF {ECO:0000313|EMBL:BAE03256.1}; TaxID=766501 species="Archaea; Crenarchaeota; Candidatus Nitrosocaldus; environmental samples.;" source="uncultured Candidatus Nitrosocaldus sp.;"
peptide chain release factor subunit 1 (aeRF-1)
SR-VP_26_10_2019_C_20cm_scaffold_3706_4
unknown

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comp(3063..3788)
DNA (726bp) protein (242aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_3706_5
unknown

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3826..4023
DNA (198bp) protein (66aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_3706_6
unknown

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4229..4912
DNA (684bp) protein (228aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_3706_7
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5018..6214
DNA (1197bp) protein (399aa)
Putative GTP binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN04_NITGG
putative GTP binding protein
Putative GTP binding protein {ECO:0000313|EMBL:AIC14820.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
SR-VP_26_10_2019_C_20cm_scaffold_3706_8
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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6383..6853
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L641_KORCO
hypothetical protein
Tax=RBG_13_Bathyarchaeota_38_9_curated
SR-VP_26_10_2019_C_20cm_scaffold_3706_9
CG_Pacearch_06, Pacearchaeota, Archaea

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6887..7696
DNA (810bp) protein (270aa)
hypothetical protein n=2 Tax=cellular organisms RepID=UPI00035E4494
exsB protein
Tax=CG_Pacearch_06
SR-VP_26_10_2019_C_20cm_scaffold_3706_10
CG_Omnitr_05, Omnitrophica, Bacteria

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7989..8402
DNA (414bp) protein (138aa)
Tax=CG_Omnitr_05
SR-VP_26_10_2019_C_20cm_scaffold_3706_11
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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8481..10889
DNA (2409bp) protein (803aa)
valS; valine--tRNA ligase (EC:6.1.1.9)
Valyl-tRNA synthetase n=1 Tax=uncultured archaeon RepID=I3RKY4_9ARCH
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_C_20cm_scaffold_3706_12

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comp(10890..11699)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-B05 RepID=UPI00038021BF
oxidoreductase
Tax=RBG_16_Archaea_50_20_curated
SR-VP_26_10_2019_C_20cm_scaffold_3706_13
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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11886..12578
DNA (693bp) protein (231aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXY9_RUBXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG03739.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
SR-VP_26_10_2019_C_20cm_scaffold_3706_14
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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12620..13570
DNA (951bp) protein (317aa)
Ser/Thr protein phosphatase family protein n=1 Tax=Thermoanaerobacter wiegelii Rt8.B1 RepID=G2MXM7_9THEO
Ser/Thr protein phosphatase family protein
Tax=BJP_IG2157_Anaerolineales_55_23
SR-VP_26_10_2019_C_20cm_scaffold_3706_trna_1
unknown

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13644..13717
DNA (74bp)
transferRNA Thr
SR-VP_26_10_2019_C_20cm_scaffold_3706_15
unknown

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comp(13793..14296)
DNA (504bp) protein (168aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_3706_16
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(14381..14785)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CXK6_9ARCH
hypothetical protein
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_C_20cm_scaffold_3706_17

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comp(14785..15873)
DNA (1089bp) protein (363aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1368239 species="Archaea; Crenarchaeota; miscellaneous Crenarchaeota group; environmental samples.;" source="uncultured miscellaneous Crenarchaeota group.;"
dbh2; DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AS45_9ARCH
SR-VP_26_10_2019_C_20cm_scaffold_3706_18
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

16177..16473
DNA (297bp) protein (99aa)
DNA/RNA-binding protein Alba n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGN5_ARCPA
DNA-binding protein Alba
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_C_20cm_scaffold_3706_19
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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16515..17861
DNA (1347bp) protein (449aa)
4-aminobutyrate aminotransferase (EC:2.6.1.19)
Acetylornithine/acetyl-lysine aminotransferase n=1 Tax=Thermofilum sp. 1910b RepID=S5Z773_9CREN
Tax=RBG_16_Bathyarchaeota_57_9_curated
SR-VP_26_10_2019_C_20cm_scaffold_3706_20
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

17881..19086
DNA (1206bp) protein (402aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AV86_9ARCH
RPA-like protein
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_C_20cm_scaffold_3706_21
unknown

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comp(19083..19214)
DNA (132bp) protein (44aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_3706_trna_2
unknown

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19578..19666
DNA (89bp)
transferRNA Thr
SR-VP_26_10_2019_C_20cm_scaffold_3706_22
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

19717..20112
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00037BDCE9
putative flavin-nucleotide-binding protein
Putative flavin-nucleotide-binding protein {ECO:0000313|EMBL:AIF83780.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
SR-VP_26_10_2019_C_20cm_scaffold_3706_trna_3
unknown

Not on your lists

20183..20267
DNA (85bp)
transferRNA Leu
SR-VP_26_10_2019_C_20cm_scaffold_3706_23
Thermoplasmatales archaeon E-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(20304..21170)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon E-plasma RepID=T0LEX5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB66502.1}; TaxID=667137 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon E-plasma.;"
ABC transporter
SR-VP_26_10_2019_C_20cm_scaffold_3706_24
Thermoplasmatales archaeon E-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(21176..22123)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon E-plasma RepID=T0MTG3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB66501.1}; TaxID=667137 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon E-plasma.;"
ABC-type multidrug transport system, ATPase component
SR-VP_26_10_2019_C_20cm_scaffold_3706_25

Not on your lists

comp(22148..22924)
DNA (777bp) protein (259aa)
ABC-2 type transporter n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DDY1_HALXS
ABC-2 type transporter
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
SR-VP_26_10_2019_C_20cm_scaffold_3706_26
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(22931..23152)
DNA (222bp) protein (74aa)
ABC transporter, ATPase subunit n=1 Tax=Methanococcoides burtonii (strain DSM 6242) RepID=Q12YU3_METBU id=5103542 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ABC transporter, ATPase subunit
Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying 29 items

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