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SR-VP_26_10_2019_C_20cm_scaffold_5122

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_20cm_scaffold_5122_1
RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1..1029
DNA (1029bp) protein (343aa)
Glycosyl hydrolase family 32 domain protein id=3638310 bin=GWC2_Ignavibacteria_56_12 species=Lachnospiraceae bacterium 3_1_57FAA_CT1 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
extracellular solute-binding protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
SR-VP_26_10_2019_C_20cm_scaffold_5122_2
unknown

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comp(1598..2167)
DNA (570bp) protein (190aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_5122_trna_1
unknown

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comp(2403..2487)
DNA (85bp)
transferRNA Leu
SR-VP_26_10_2019_C_20cm_scaffold_5122_3

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2622..3596
DNA (975bp) protein (325aa)
Cystathionine beta-synthase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5Q2_SPHTD
cystathionine beta-synthase
Tax=RBG_16_Archaea_50_20_curated
SR-VP_26_10_2019_C_20cm_scaffold_5122_4
GWB2_Planctomycetes_41_19_curated, Brocadiales, Planctomycetes, Bacteria

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3623..4783
DNA (1161bp) protein (387aa)
Cystathionine gamma-synthase id=4765389 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
cystathionine beta-lyase
Tax=GWB2_Planctomycetes_41_19_curated
SR-VP_26_10_2019_C_20cm_scaffold_5122_5
unknown

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4906..5217
DNA (312bp) protein (104aa)
AsnC family transcriptional regulator n=1 Tax=mine drainage metagenome RepID=T0ZKG2_9ZZZZ
AsnC family transcriptional regulator {ECO:0000313|EMBL:EQD45133.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
AsnC family transcriptional regulator
SR-VP_26_10_2019_C_20cm_scaffold_5122_6
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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5316..6923
DNA (1608bp) protein (536aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=667138 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon I-plasma.;"
Potassium-transporting ATPase A chain n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LA52_9EURY
hypothetical protein
SR-VP_26_10_2019_C_20cm_scaffold_5122_7
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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6916..9078
DNA (2163bp) protein (721aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
Potassium-transporting ATPase B chain n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0ARC1_FERAC
hypothetical protein
SR-VP_26_10_2019_C_20cm_scaffold_5122_8
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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9089..9556
DNA (468bp) protein (156aa)
Potassium-transporting ATPase subunit C n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0MTH0_9EURY
Potassium-transporting ATPase subunit C {ECO:0000313|EMBL:EQB64625.1}; TaxID=667138 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon I-plasma.;"
potassium-transporting ATPase subunit C
SR-VP_26_10_2019_C_20cm_scaffold_5122_9
unknown

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comp(9553..9867)
DNA (315bp) protein (105aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_5122_10

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9965..12709
DNA (2745bp) protein (915aa)
aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N649_9ARCH
Tax=RBG_16_Archaea_50_20_curated
SR-VP_26_10_2019_C_20cm_scaffold_5122_11
unknown

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12731..12838
DNA (108bp) protein (36aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_5122_12
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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13054..14037
DNA (984bp) protein (328aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M313_9FIRM
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
SR-VP_26_10_2019_C_20cm_scaffold_5122_13
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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14180..14464
DNA (285bp) protein (95aa)
DNA-directed RNA polymerase, subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE60_NITGG
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_C_20cm_scaffold_5122_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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14471..17827
DNA (3357bp) protein (1119aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
rpoB; DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
DNA-directed RNA polymerase n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0ILI7_NITGG
Displaying 15 items

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