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SR-VP_26_10_2019_C_20cm_scaffold_5935

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_20cm_scaffold_5935_1
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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1..975
DNA (975bp) protein (325aa)
top6A; Type 2 DNA topoisomerase 6 subunit A (EC:5.99.1.3)
Type II DNA topoisomerase VI subunit A n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUF1_9ARCH
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_C_20cm_scaffold_5935_2
unknown

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1055..1288
DNA (234bp) protein (78aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_5935_3
unknown

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comp(1318..1683)
DNA (366bp) protein (122aa)
Nitrogen regulatory protein PII n=3 Tax=mine drainage metagenome RepID=T1ATY9_9ZZZZ
nitrogen regulatory protein p-ii
Nitrogen regulatory protein PII {ECO:0000313|EMBL:EQD44114.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
SR-VP_26_10_2019_C_20cm_scaffold_5935_4
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1777..2184)
DNA (408bp) protein (136aa)
Uncharacterized protein {ECO:0000313|EMBL:KFE67420.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein id=1245676 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
SR-VP_26_10_2019_C_20cm_scaffold_5935_5

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2342..3472
DNA (1131bp) protein (377aa)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMR3_ACIS0
Uncharacterized protein {ECO:0000313|EMBL:AKA47827.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
aspartate/tyrosine/aromatic aminotransferase
SR-VP_26_10_2019_C_20cm_scaffold_5935_6
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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3515..4468
DNA (954bp) protein (318aa)
Iron complex ABC transporter substrate-binding protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4H7_9ARCH
iron complex ABC transporter substrate-binding protein
Iron complex ABC transporter substrate-binding protein {ECO:0000313|EMBL:BAJ47196.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.;"
SR-VP_26_10_2019_C_20cm_scaffold_5935_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(4488..5324)
DNA (837bp) protein (279aa)
Tryptophan 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000256|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000256|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan oxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan pyrrolase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophanase {ECO:0000256|HAMAP-Rule:MF_01972}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
tryptophan 2 3-dioxygenase n=1 Tax=Kribbella catacumbae RepID=UPI00036B1445
tryptophan 23-dioxygenase
SR-VP_26_10_2019_C_20cm_scaffold_5935_8
Thermofilum sp. 1910b, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(5359..6738)
DNA (1380bp) protein (460aa)
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1365176 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum sp. 1910b.;"
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00037124AD
SR-VP_26_10_2019_C_20cm_scaffold_5935_9
uncultured marine crenarchaeote AD1000-325-A12, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(6756..7685)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=uncultured marine crenarchaeote AD1000-325-A12 RepID=B3V5P8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ACF09618.1}; TaxID=526639 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote AD1000-325-A12.;"
hypothetical protein
SR-VP_26_10_2019_C_20cm_scaffold_5935_10
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(7704..8621)
DNA (918bp) protein (306aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D7N1_HALXS
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein {ECO:0000313|EMBL:AEH35479.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6).;"
SR-VP_26_10_2019_C_20cm_scaffold_5935_11
unknown

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9105..11045
DNA (1941bp) protein (647aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_5935_12
unknown

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11187..11417
DNA (231bp) protein (77aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_5935_13
unknown

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11633..12592
DNA (960bp) protein (320aa)
Secreted protein containing Glycosyl transferase, family 2 domain protein {ECO:0000313|EMBL:EQD35440.1}; EC=2.-.-.- {ECO:0000313|EMBL:EQD35440.1};; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Secreted protein containing Glycosyl transferase, family 2 domain protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1A0U0_9ZZZZ
SR-VP_26_10_2019_C_20cm_scaffold_5935_14
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

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12633..13421
DNA (789bp) protein (263aa)
type 11 methyltransferase n=1 Tax=Streptomyces sp. S4 RepID=UPI0002494426
type 11 methyltransferase
Tax=RBG_16_Chloroflexi_54_11_curated
SR-VP_26_10_2019_C_20cm_scaffold_5935_15
Candidatus Nitrosopumilus salaria, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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13467..13856
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D1Z1_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EIJ65734.1}; TaxID=859350 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus salaria BD31.;"
SR-VP_26_10_2019_C_20cm_scaffold_5935_16
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13904..14347
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ97_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15075.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
SR-VP_26_10_2019_C_20cm_scaffold_5935_17
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14367..15380)
DNA (1014bp) protein (338aa)
Putative 3-carboxymuconate cyclase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2ICM6_BEII9
Lactonase, 7-bladed beta-propeller {ECO:0000313|EMBL:GAO01742.1}; Flags: Precursor;; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
putative 3-carboxymuconate cyclase
SR-VP_26_10_2019_C_20cm_scaffold_5935_18
unknown

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comp(15650..15895)
DNA (246bp) protein (82aa)

This feature has no annotations

Displaying 18 items

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