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SR-VP_26_10_2019_C_20cm_scaffold_12076

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_20cm_scaffold_12076_1
unknown

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2..364
DNA (363bp) protein (121aa)
Pleiotropic regulatory protein n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B3F382
Uncharacterized protein {ECO:0000313|EMBL:CEG11019.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
hypothetical protein
SR-VP_26_10_2019_C_20cm_scaffold_12076_2
Arthrobacter sp. IHBB 11108, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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361..1170
DNA (810bp) protein (270aa)
Glycosyl transferase family 2 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG98_CHIPD
dolichol-phosphate mannosyltransferase
Dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:AJT42879.1}; TaxID=1618207 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. IHBB 11108.;"
SR-VP_26_10_2019_C_20cm_scaffold_12076_3
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(1185..1466)
DNA (282bp) protein (94aa)
HTH DNA binding domain n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1S0Z7_THEPD
hypothetical protein
HTH DNA binding domain {ECO:0000313|EMBL:ABL79127.1}; TaxID=368408 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum pendens (strain Hrk 5).;"
SR-VP_26_10_2019_C_20cm_scaffold_12076_4
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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1570..1794
DNA (225bp) protein (75aa)
DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger) (EC:2.7.7.6)
DNA-directed RNA polymerase, subunit P n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICM2_NITGG
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_C_20cm_scaffold_12076_5
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1876..3357
DNA (1482bp) protein (494aa)
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycyl-tRNA synthetase {ECO:0000313|EMBL:AIF83056.1}; EC=6.1.1.14 {ECO:0000313|EMBL:AIF83056.1};; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Glycine--tRNA ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INJ2_NITGG
SR-VP_26_10_2019_C_20cm_scaffold_12076_6
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(3339..4157)
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4Z2_9ARCH
hypothetical protein
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_C_20cm_scaffold_12076_7
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(4219..4926)
DNA (708bp) protein (236aa)
Putative helix-turn-helix motif protein n=1 Tax=uncultured marine microorganism HF4000_ANIW141A21 RepID=B3T5A4_9ZZZZ
HTH-type transcriptional regulator
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_C_20cm_scaffold_12076_8
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(5248..6765)
DNA (1518bp) protein (506aa)
DUF87 domain-containing protein id=2756267 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Candidatus Nitrososphaera gargensis genus=Nitrososphaera taxon_order=Nitrososphaerales taxon_class=unknown phylum=Thaumarchaeota tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_C_20cm_scaffold_12076_9
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6776..7768)
DNA (993bp) protein (331aa)
Putative NurA domain-containing protein id=2756050 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Candidatus Nitrososphaera gargensis genus=Nitrososphaera taxon_order=Nitrososphaerales taxon_class=unknown phylum=Thaumarchaeota tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
putative NurA domain-containing protein
Putative NurA domain-containing protein {ECO:0000313|EMBL:AIC15569.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
SR-VP_26_10_2019_C_20cm_scaffold_12076_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7940..8371
DNA (432bp) protein (144aa)
Putative uncharacterized protein id=2756046 bin=GWC2_CP_Nitrospirae-rel_42_7 species=uncultured marine microorganism HF4000_ANIW141A21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57684.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
SR-VP_26_10_2019_C_20cm_scaffold_12076_11

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comp(8353..8886)
DNA (534bp) protein (178aa)
Uncharacterized protein id=2756040 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Candidatus Nitrososphaera gargensis genus=Nitrososphaera taxon_order=Nitrososphaerales taxon_class=unknown phylum=Thaumarchaeota tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Uncharacterized protein {ECO:0000313|EMBL:AIF16472.1}; TaxID=1456270 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_74_C10.;"
hypothetical protein
SR-VP_26_10_2019_C_20cm_scaffold_12076_12

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comp(8927..9286)
DNA (360bp) protein (120aa)
id=2756038 bin=GWC2_CP_Nitrospirae-rel_42_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Uncharacterized protein {ECO:0000313|EMBL:AIF16473.1}; TaxID=1456270 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_74_C10.;"
Displaying 12 items

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