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SR-VP_26_10_2019_C_20cm_scaffold_25211

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_C_20cm_scaffold_25211_1
unknown

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3..242
DNA (240bp) protein (80aa)

This feature has no annotations

SR-VP_26_10_2019_C_20cm_scaffold_25211_2
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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276..1241
DNA (966bp) protein (322aa)
Uncharacterized protein MJ1225 n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=Y1225_METJA
hypothetical protein
CBS domain containing membrane protein {ECO:0000313|EMBL:ABK16631.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
SR-VP_26_10_2019_C_20cm_scaffold_25211_3
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1282..2046)
DNA (765bp) protein (255aa)
Putative transposase, IS605 OrfB family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFZ7_NITGG
putative transposase IS605 OrfB family
Putative transposase IS605 OrfB family {ECO:0000313|EMBL:AIC15978.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
SR-VP_26_10_2019_C_20cm_scaffold_25211_4
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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2629..3630
DNA (1002bp) protein (334aa)
50S ribosomal protein L3p n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0II78_NITGG
rpl3p; 50S ribosomal protein L3p
Tax=RBG_16_Thaumarchaeota_49_8_curated
SR-VP_26_10_2019_C_20cm_scaffold_25211_5

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3637..4452
DNA (816bp) protein (272aa)
50S ribosomal protein L4 n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4W9_9ARCH
Large subunit ribosomal protein L4e {ECO:0000313|EMBL:AJS13168.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
large subunit ribosomal protein L4e
SR-VP_26_10_2019_C_20cm_scaffold_25211_6

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4442..4708
DNA (267bp) protein (89aa)
50S ribosomal protein L23P n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IFS3_NITGG
50S ribosomal protein L23P {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1456198 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_55_F05.;"
rpl23p; 50S ribosomal protein L23p
SR-VP_26_10_2019_C_20cm_scaffold_25211_7

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4714..5475
DNA (762bp) protein (254aa)
50S ribosomal protein L2 n=1 Tax=uncultured crenarchaeote RepID=Q702G1_9CREN
Ribosomal protein L2 (RP-L2, rplB) {ECO:0000313|EMBL:AIF12384.1}; TaxID=1456198 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_55_F05.;"
rpl2p; 50S ribosomal protein L2p
Displaying 7 items

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