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Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_1
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2..154)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYS5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EGP94469.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
hypothetical protein
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_2
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(229..570)
DNA (342bp) protein (114aa)
Nascent polypeptide-associated complex protein n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KLH9_9ARCH
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
ubiquitin-associated domain-containing protein; K03626 nascent polypeptide-associated complex subunit alpha
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_3
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(567..1040)
DNA (474bp) protein (158aa)
PUA domain-containing protein n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KLI0_9ARCH
PUA domain-containing protein {ECO:0000313|EMBL:EGG41744.1}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
PUA domain-containing protein; K07398 conserved protein with predicted RNA binding PUA domain
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_4

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1134..2186
DNA (1053bp) protein (351aa)
Phosphate uptake regulator PhoU n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B5X7_9ARCH rbh
Phosphate-specific transport system accessory protein PhoU {ECO:0000313|EMBL:KFM20156.1}; TaxID=1502295 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-P11.;"
phosphate uptake regulator PhoU rbh
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_5

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2219..3325
DNA (1107bp) protein (369aa)
GTPase HflX n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E730_9ARCH
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1502295 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-P11.;"
GTP1/OBG protein; K03665 GTP-binding protein HflX rbh
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_6
Candidatus Nitrosopumilus salaria, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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3315..3848
DNA (534bp) protein (178aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_00077}; TaxID=859350 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus salaria BD31.;"
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D1M6_9ARCH
hypothetical protein
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_7
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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3876..4391
DNA (516bp) protein (172aa)
Transcription factor E n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A625_NITMS rbh
transcription factor TFIIE subunit alpha; K03136 transcription initiation factor TFIIE subunit alpha rbh
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Transcription initiation factor TFIIE {ECO:0000256|HAMAP-Rule:MF_01909}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SCM1).;"
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_8
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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4417..4902
DNA (486bp) protein (162aa)
UspA domain-containing protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BDN5_9ARCH
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AFS82421.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.;"
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_9
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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5026..6417
DNA (1392bp) protein (464aa)
Putative succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:AJM91661.1}; EC=1.2.1.79 {ECO:0000313|EMBL:AJM91661.1};; TaxID=1582439 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.;"
Aldehyde dehydrogenase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYT2_9ARCH rbh
aldehyde dehydrogenase rbh
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_10
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(6442..6714)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BDJ4_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS83534.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.;"
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_11
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(6717..7283)
DNA (567bp) protein (189aa)
Hemerythrin HHE cation binding domain-containing protein n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KLI8_9ARCH
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:EPA04902.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
hemerythrin HHE cation binding domain-containing protein
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_12
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(7377..7622)
DNA (246bp) protein (82aa)
DNA topoisomerase I-fused to SWI domain n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A629_NITMS
DNA topoisomerase I-fused to SWI domain {ECO:0000313|EMBL:AJM91658.1}; TaxID=1582439 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.;"
fused DNA topoisomerase I/SWI domain-containing protein
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_13
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(7659..8315)
DNA (657bp) protein (219aa)
Deaminase-reductase domain-containing protein n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KLJ0_9ARCH
Deaminase-reductase domain-containing protein {ECO:0000313|EMBL:EGG41754.1}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
deaminase-reductase domain-containing protein
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_14

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comp(8302..9492)
DNA (1191bp) protein (397aa)
Amidohydrolase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B8X5_9ARCH
Amidohydrolase {ECO:0000313|EMBL:AIF08623.1}; TaxID=1456121 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_31_G08.;"
amidohydrolase
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_15
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(9486..10238)
DNA (753bp) protein (251aa)
GTP cyclohydrolase III {ECO:0000256|HAMAP-Rule:MF_00608}; EC=3.5.4.29 {ECO:0000256|HAMAP-Rule:MF_00608};; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.;"
GTP cyclohydrolase III n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BDJ7_9ARCH
GTP cyclohydrolase IIA
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_16
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(10235..10636)
DNA (402bp) protein (134aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.;"
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BER5_9ARCH
6,7-dimethyl-8-ribityllumazine synthase
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_17
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(10654..11319)
DNA (666bp) protein (222aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|RuleBase:RU003843}; Short=DHBP synthase {ECO:0000256|RuleBase:RU003843};; EC=4.1.99.12 {ECO:0000256|RuleBase:RU003843};; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B9G3_9ARCH
3,4-dihydroxy-2-butanone 4-phosphate synthase
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_18
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(11398..11985)
DNA (588bp) protein (196aa)
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EPA04905.1}; EC=2.5.1.9 {ECO:0000313|EMBL:EPA04905.1};; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
Riboflavin synthase, alpha subunit n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E0L9_9ARCH
riboflavin synthase subunit alpha
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_19
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(12091..12798)
DNA (708bp) protein (236aa)
TPR repeat-containing protein n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KLJ6_9ARCH
TPR repeat-containing protein {ECO:0000313|EMBL:EGG41760.1}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
hypothetical protein
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_20
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(13082..13432)
DNA (351bp) protein (117aa)
Response regulator receiver protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B5Z0_9ARCH
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AFS81613.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensis AR1.;"
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_21
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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13488..14084
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BES1_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS83545.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.;"
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_22
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(14097..14951)
DNA (855bp) protein (285aa)
citryl-CoA lyase (EC:4.1.3.34); K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34]
Citryl-CoA lyase {ECO:0000313|EMBL:ABX13517.1}; EC=4.1.3.34 {ECO:0000313|EMBL:ABX13517.1};; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SCM1).;"
Citryl-CoA lyase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A639_NITMS
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_23
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(14959..16035)
DNA (1077bp) protein (359aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A640_NITMS rbh
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:AJM91648.1}; TaxID=1582439 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.;"
alcohol dehydrogenase rbh
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_24
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(16078..16362)
DNA (285bp) protein (95aa)
Double-stranded DNA-binding domain protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E0L0_9ARCH
Double-stranded DNA-binding domain protein {ECO:0000313|EMBL:EPA04895.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
DNA-binding protein
Crystal_Geyser_CG15_big_fil_post_rev_8_21_14_0.20_scaffold_1160_25
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists


comp(16370..16822)
DNA (453bp) protein (151aa)
30S ribosomal protein S19e n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A642_NITMS
30S ribosomal protein S19e; K02966 small subunit ribosomal protein S19e
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SCM1).;"
Displaying 25 items

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