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SR-VP_0-2_scaffold_141_2962744

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_0-2_scaffold_141_2962744_1
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

comp(3..221)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T9U0_METSL
hypothetical protein
Tax=RBG_13_Aminicenantes_63_10_curated
SR-VP_0-2_scaffold_141_2962744_2
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(316..1005)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TN26_METAC
Uncharacterized protein {ECO:0000313|EMBL:AKB36299.1}; TaxID=1434118 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae C2J.;"
hypothetical protein
SR-VP_0-2_scaffold_141_2962744_3
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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comp(1148..1516)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TK72_9EURY
hypothetical protein
Tax=RBG_13_Bathyarchaeota_52_12_curated
SR-VP_0-2_scaffold_141_2962744_4
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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comp(1540..2100)
DNA (561bp) protein (187aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GH42_METPE
riboflavin biosynthesis protein RibD
Tax=RBG_16_Chloroflexi_54_18_curated
SR-VP_0-2_scaffold_141_2962744_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2115..2543)
DNA (429bp) protein (143aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71390.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative uncharacterized protein id=2888704 bin=GWF1_Spirochaetes_51_8 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
glyoxalase/bleomycin resistance protein/dioxygenase
SR-VP_0-2_scaffold_141_2962744_6
RIFCSPHIGHO2_01_FULL_OP11_Gottesmanbacteria_39_10_curated, Gottesmanbacteria, Microgenomates, Bacteria

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comp(2540..3223)
DNA (684bp) protein (228aa)
hypothetical protein id=8309 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Gottesmanbacteria_39_10_curated
SR-VP_0-2_scaffold_141_2962744_7
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3207..3710)
DNA (504bp) protein (168aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DXS8_9PROT
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:KJS28911.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatitalea sp. BRH_c12.;"
3-demethylubiquinone-9 3-methyltransferase
SR-VP_0-2_scaffold_141_2962744_8
RBG_13_Chloroflexi_48_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(3728..4396)
DNA (669bp) protein (223aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WII1_GEOS8
dihydrofolate reductase
Tax=RBG_13_Chloroflexi_48_10_curated
SR-VP_0-2_scaffold_141_2962744_9
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4399..5658)
DNA (1260bp) protein (420aa)
Alpha/beta hydrolase Fold protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MFM3_9RHIZ
Alpha/beta hydrolase Fold protein {ECO:0000313|EMBL:EKF20956.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
alpha/beta hydrolase fold protein
SR-VP_0-2_scaffold_141_2962744_10
unknown

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comp(5693..6136)
DNA (444bp) protein (148aa)
id=24610933 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2962744_11
unknown

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comp(6140..6733)
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11S07_CYTH3
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2962744_12
unknown

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7063..7593
DNA (531bp) protein (177aa)
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EVE6_9BACT
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2962744_13
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7745..8701
DNA (957bp) protein (319aa)
ATP-binding protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q469P3_METBF
ATP-binding protein
ATP-binding protein {ECO:0000313|EMBL:AAZ71399.1}; TaxID=269797 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri (strain Fusaro / DSM 804).;"
SR-VP_0-2_scaffold_141_2962744_14
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8688..9455
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q469P4_METBF
ABC-type multidrug transport system, permease component
ABC-type multidrug transport system, permease component {ECO:0000313|EMBL:AKB51520.1}; TaxID=1434109 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri str. Wiesmoor.;"
SR-VP_0-2_scaffold_141_2962744_15
unknown

Not on your lists

9849..10004
DNA (156bp) protein (52aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2962744_trna_2
unknown

Not on your lists

comp(10199..10282)
DNA (84bp)
transferRNA Ser
SR-VP_0-2_scaffold_141_2962744_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10312..11304)
DNA (993bp) protein (331aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01081}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Probable tRNA pseudouridine synthase B n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMQ1_METH6
putative tRNA pseudouridine synthase B
SR-VP_0-2_scaffold_141_2962744_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11301..11822)
DNA (522bp) protein (174aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054797}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054803};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00239}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZE6_METFV
SR-VP_0-2_scaffold_141_2962744_18
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(11819..12418)
DNA (600bp) protein (200aa)
Integral membrane protein DUF106 n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZS6_METBU
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_2962744_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12415..13062)
DNA (648bp) protein (216aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=uncultured archaeon RepID=D1JIK3_9ARCH
SR-VP_0-2_scaffold_141_2962744_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13167..13385)
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72182.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_0-2_scaffold_141_2962744_21
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(13555..13926)
DNA (372bp) protein (124aa)
Transcriptional regulator, PadR family n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B595_METTP
PadR-like family transcriptional regulator
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ABK13869.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta thermophila (strain DSM 6194 / PT) (Methanothrix; thermophila (strain DSM 6194 / PT)).;"
SR-VP_0-2_scaffold_141_2962744_trna_1
unknown

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comp(14591..14662)
DNA (72bp)
transferRNA Arg
SR-VP_0-2_scaffold_141_2962744_22
unknown

Not on your lists

comp(14690..15151)
DNA (462bp) protein (154aa)
methylated-DNA/protein-cysteinemethyltransferase (EC:2.1.1.63)
Methylated-DNA/protein-cysteinemethyltransferase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E867_METMS
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2962744_23
unknown

Not on your lists

15302..16105
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W7M8_UNCMA
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_2962744_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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16263..17603
DNA (1341bp) protein (447aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JEL4_9ARCH
Tetratricopeptide repeat protein {ECO:0000313|EMBL:KCZ72518.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_0-2_scaffold_141_2962744_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17874..18008)
DNA (135bp) protein (45aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70413.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_0-2_scaffold_141_2962744_26
unknown

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18271..18633
DNA (363bp) protein (121aa)
50S ribosomal protein L18e n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IB00_METCZ
LSU ribosomal protein L18e
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 28 items

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