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S10_scaffold_1299_curated

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_1299_curated_1
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1..699)
DNA (699bp) protein (233aa)
Pyruvate,phosphate dikinase {ECO:0000313|EMBL:AKB82610.1}; EC=2.7.9.1 {ECO:0000313|EMBL:AKB82610.1};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Pyruvate,phosphate dikinase (EC:2.7.9.1)
Pyruvate phosphate dikinase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CN6_METBF
S10_scaffold_1299_curated_2
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1047..1307
DNA (261bp) protein (87aa)
snoRNP protein GAR1 n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CN7_METBF
gar1 - like small nucleolar rnp
Gar1-like small nucleolar rnp {ECO:0000313|EMBL:AKB82609.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
S10_scaffold_1299_curated_3
unknown

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comp(1412..1747)
DNA (336bp) protein (112aa)

This feature has no annotations

S10_scaffold_1299_curated_4
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1973..2512
DNA (540bp) protein (180aa)
Transcription initiation factor IIB n=3 Tax=Methanosarcina mazei RepID=TF2B_METMA rbh
Transcription initiation factor B
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
S10_scaffold_1299_curated_5
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2778..3434
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CN9_METBF rbh
Transporter, LysE family {ECO:0000313|EMBL:AKB82607.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Transporter, LysE family
S10_scaffold_1299_curated_6
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3743..4192)
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1PY03_METMZ
Uncharacterized protein {ECO:0000313|EMBL:AKB82606.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_1299_curated_7
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4416..5426
DNA (1011bp) protein (337aa)
Methyltransferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CP0_METBF rbh
tRNA (Guanine37-N1)-methyltransferase {ECO:0000313|EMBL:AKB82605.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
tRNA (Guanine37-N1) -methyltransferase
S10_scaffold_1299_curated_trna_1
unknown

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5753..5824
DNA (72bp)
transferRNA Thr
S10_scaffold_1299_curated_8
unknown

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comp(6659..6868)
DNA (210bp) protein (70aa)

This feature has no annotations

S10_scaffold_1299_curated_9
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6948..7466)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CP2_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB82604.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_1299_curated_10
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7761..8849
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TU51_METAC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB53492.1}; TaxID=1434108 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri MS.;"
S10_scaffold_1299_curated_11
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8898..9881
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TU52_METAC rbh
Uncharacterized protein {ECO:0000313|EMBL:AKB58400.1}; TaxID=1434106 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 227.;"
hypothetical protein
S10_scaffold_1299_curated_12
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10029..11057
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TU53_METAC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB53494.1}; TaxID=1434108 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri MS.;"
S10_scaffold_1299_curated_13
unknown

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11054..11275
DNA (222bp) protein (74aa)

This feature has no annotations

S10_scaffold_1299_curated_14
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11344..12171
DNA (828bp) protein (276aa)
Formate dehydrogenase chain D {ECO:0000313|EMBL:AKB82600.1}; EC=1.2.1.2 {ECO:0000313|EMBL:AKB82600.1};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
FdhD protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CP5_METBF rbh
fdhD protein rbh
S10_scaffold_1299_curated_15
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12343..12804)
DNA (462bp) protein (154aa)
Iron-sulfur flavoprotein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CP6_METBF
Iron-sulfur flavoprotein {ECO:0000313|EMBL:AKB82599.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
iron-sulfur flavoprotein
S10_scaffold_1299_curated_16
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13233..13619
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CP7_METBF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB52596.1}; TaxID=1434109 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri str. Wiesmoor.;"
S10_scaffold_1299_curated_17
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13631..13915
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CP9_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB82598.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_1299_curated_18
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14189..14467)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CQ0_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB82597.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
Displaying 19 items

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