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S10_scaffold_3705_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_3705_curated_1
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1..132
DNA (132bp) protein (44aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Lysyl-tRNA synthetase (class I) (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Methanosarcina barkeri RepID=SYK_METBA
S10_scaffold_3705_curated_2
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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151..831
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CD1_METBF rbh
LysM protein {ECO:0000313|EMBL:AKB82535.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
LysM protein
S10_scaffold_3705_curated_3
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1103..1360)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CD0_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB82536.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_3705_curated_4
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1504..1962)
DNA (459bp) protein (153aa)
Putative 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 {ECO:0000256|HAMAP-Rule:MF_03036}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_03036};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Putative 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=DNPH1_METBF
deoxynucleoside 5'-monophosphate N-glycosidase
S10_scaffold_3705_curated_5
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2005..4353)
DNA (2349bp) protein (783aa)
Protease {ECO:0000313|EMBL:AKB82538.1}; EC=3.4.-.- {ECO:0000313|EMBL:AKB82538.1};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Protease (EC:3.4.-.-)
Peptidase family protein U32 n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CC8_METBF rbh
S10_scaffold_3705_curated_6
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4362..4607)
DNA (246bp) protein (82aa)
Protease (EC:3.4.-.-)
Protease {ECO:0000313|EMBL:AKB58445.1}; EC=3.4.-.- {ECO:0000313|EMBL:AKB58445.1};; TaxID=1434106 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 227.;"
Peptidase family protein U32 n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CC8_METBF
S10_scaffold_3705_curated_7
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4806..5204)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CC7_METBF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB42758.1}; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
S10_scaffold_3705_curated_8
Methanosarcina sp. Kolksee, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5416..5703)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TT97_METAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB46251.1}; TaxID=1434099 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. Kolksee.;"
S10_scaffold_3705_curated_9
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5743..6564)
DNA (822bp) protein (274aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Imidazole glycerol phosphate synthase cyclase subunit (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=HIS6_METBF rbh
S10_scaffold_3705_curated_10
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6997..7461)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CC4_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB82542.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
Displaying 10 items

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